Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2676 ATGGGCGAGGAAGAGAAGAAGCCAGAGGAAAGCAAGGTGGAGGAGAAGAAAGCAGAGGAACCGAAGAAGGAAGAAGGAGTGGAGAAGAAGGGAGCGAAAGAGGAAGGGAAGAAGCCGGAAAAAGCGGCGGAAGAGGAAAAAGCGGAGGAGTCCAAAGATGGGAAGGAAGCAAAAGAGGAAAGTGCGCCGCCACCAGCAGAGATAGTGCTCAAAGTGTTCATGCATTGCGAAGGTTGTGCCCGCAAGGTTCGTCGCTCCCTCAAAGGCTTCCCAGGGGTGGAAGATGTAATAACAGATTGCAAGACTCACAAGGTGGTGGTTAAAGGAGAGAAGGCTGATCCAGTGAAGGTTCTGGAGAGAGTACAGAGGAAGAGCCACAGACAAGTTGAGCTTCTTTCTCCCATCCCTAAACCACCCTCAGAGGAGGAGAAAAAACCGGAAGAGAAAGAGAAGCCCAAGCCTGAGGAGAAGAAAGAAGAGCCTCAGGTTATCACAGTTGTGCTGCAAGCCCACATGCATTGCGAAGCATGTGCGCAGGAAATCAAGAGACGTATAGAGAGAATGAAGGGAGTGGAGTCAGCAGAACCGGATCTGAAAAACTCGCATGTGAGTGTGAAGGGAGTGTTTGAGGCTGCCAATTTGGTGGACTACGTGTACAAGAGAACCGGGAAGCAAGCAGTGATAGTGAAGCAAGAGCCAGTGAAGAAAGAGGAAGGAAAAGAAGAGAAGAAGGGTGAGGAAGGTGACAAAGAAAAGAAAGGAAGTGGTGAAGGAGGAGAGAAGAAGGAAGGAGAGGGAGAAGCCAAACCAGCGGAGGATGGTACAGAAGAGAGCAAAGTGGTTGAACTGAAGAAGAATGAATATTACTACAACCCGCCAAGGTATGGCATGGAGTTCTATGCATATCCCGGGCCTGCAGCATACCCTCCCCAGATCTTCACTTATGAGAACCAGATCTTCAGTGATGAGAACCCTAATGCTTGTTCTGTCATGTAA 996 0.494 MGEEEKKPEESKVEEKKAEEPKKEEGVEKKGAKEEGKKPEKAAEEEKAEESKDGKEAKEESAPPPAEIVLKVFMHCEGCARKVRRSLKGFPGVEDVITDCKTHKVVVKGEKADPVKVLERVQRKSHRQVELLSPIPKPPSEEEKKPEEKEKPKPEEKKEEPQVITVVLQAHMHCEACAQEIKRRIERMKGVESAEPDLKNSHVSVKGVFEAANLVDYVYKRTGKQAVIVKQEPVKKEEGKEEKKGEEGDKEKKGSGEGGEKKEGEGEAKPAEDGTEESKVVELKKNEYYYNPPRYGMEFYAYPGPAAYPPQIFTYENQIFSDENPNACSVM* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2676 331 MobiDBLite consensus disorder prediction 1 62 - -
Dod04g2676 331 MobiDBLite consensus disorder prediction 137 161 - -
Dod04g2676 331 SUPERFAMILY HMA, heavy metal-associated domain 165 228 IPR036163 GO:0046872
Dod04g2676 331 Gene3D - 160 229 - -
Dod04g2676 331 ProSiteProfiles Heavy-metal-associated domain profile. 172 228 IPR006121 GO:0046872
Dod04g2676 331 CDD HMA 170 226 IPR006121 GO:0046872
Dod04g2676 331 Coils Coil 40 60 - -
Dod04g2676 331 MobiDBLite consensus disorder prediction 233 283 - -
Dod04g2676 331 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 331 IPR044577 GO:0046872
Dod04g2676 331 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3-LIKE 1 331 - -
Dod04g2676 331 CDD HMA 74 130 IPR006121 GO:0046872
Dod04g2676 331 Pfam Heavy-metal-associated domain 171 212 IPR006121 GO:0046872
Dod04g2676 331 Pfam Heavy-metal-associated domain 70 123 IPR006121 GO:0046872
Dod04g2676 331 MobiDBLite consensus disorder prediction 121 161 - -
Dod04g2676 331 ProSiteProfiles Heavy-metal-associated domain profile. 74 130 IPR006121 GO:0046872
Dod04g2676 331 Gene3D - 65 137 - -
Dod04g2676 331 MobiDBLite consensus disorder prediction 1 66 - -
Dod04g2676 331 SUPERFAMILY HMA, heavy metal-associated domain 69 124 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2676 Dod-Chr4 50726546 50728954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2676 - - gmx:100796289 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2676 04 50726546 50728954 Dod09g0124 09 1876205 1877923 PCT