Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2632 ATGGGAACTTTGAAGCTGGGTCTTCTTGGGCTTCTCTTTGCTGCTTCTCTCTTTGCAATTGGTGCTGTGGAGCTGGCCAGGAATCAACCCCCTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAAGTTTTTGTTTATGAACTTCCAAGCAAATATAATAAGAAAATTCTGCAGAAGGACCCAAGATGCCTCAACCATATGTTTGCTGCCGAGATCTTTATGCACCGGTTTCTCTTATCTAGCCCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATATACCACCTGTGATTTGACACCAAATGGCCTCCCTCTACCTTTTAAATCACCGCGAATGATGAGAAGTGCCATTCAACTTATTTCTTCAAACTGGCCTTATTGGAACCGGACAGAAGGGGCAGATCATTTCTTCGTGGTTCCTCATGACTTTGGGGCATGCTTTCACTATCAAGAAGAGAAGGCAATTGAAAGAGGGATTCTTCCACTGCTACAGCGTGCTACCTTGGTTCAAACATTTGGACAGAGGAATCATGTCTGCTTGAAAGAAGGCTCAATTACCATTCCTCCATACGCTCCACCACAGAAAATGCATACTCACCTAATTCCTGATAAGACTCCGAGGTCCATTTTTGTGTACTTCCGAGGCCTTTTTTATGATGTTGGAAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGGGCAGCAGTGTGGGAGAACTTTAAGGACAATCCACTATTTGACATTTCCACCGAGCATCCAACCACATACTATGAGGACATGCAACGAGCTGTGTTTTGTTTGTGCCCGCTTGGATGGGCCCCTTGGAGCCCAAGATTGGTTGAAGCTGTGATATTTGGTTGCATACCTGTTATTATTGCAGATGACATTGTTCTGCCATTTGCTGATGCAATTCCATGGGAAGAGATTGGGGTGTTTGTTGATGAGGAGGATGTCCCTAAGTTGGATACCATACTCACATCTATCCCACCAGAAGTTATATTAAGGAAACAAAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCTCAACCTGCTCAACCCGGAGATGCTTTCCATCAGGTTTTAAATGGTCTCGCGCGTAAGTTGCCGCACCACAAGAGCGTGTTCTTGAAACCAGGGGAGAAGATCTTGAATTGGACTGCTGGCCCTGTGGGTGACCTTAAACCTTGGTAA 1251 0.4508 MGTLKLGLLGLLFAASLFAIGAVELARNQPPERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEEDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHHKSVFLKPGEKILNWTAGPVGDLKPW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2632 416 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
Dod04g2632 416 Pfam Exostosin family 49 344 IPR040911 -
Dod04g2632 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2632 Dod-Chr4 50159879 50165211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2632 K20870 - gmx:100797122 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2632 04 50159879 50165211 Dod09g0872 09 28327140 28328908 PCT
Dod09g0076 09 1038602 1042453 Dod04g2632 04 50159879 50165211 PCT