Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2601 ATGAATTCTCCAATTCGTGTCCCTTCAACGCCTTCCTCCTCTTCTTGCTCCTATATTCGTCCTCCTCCATGCCTCACTGATGCCTCTTGTAACTTCAAGTTTCCTCTGCTGTTGCCACAGGCAATCTGTACCTCTCAAAAGATGTATCGCTGCTCGGGGGGCCAAGTGGGGGCTTCTACTAACACTAATCCCTTGAAAAATTACGTAGTGAGCAGATGTTCTCCAGAATGGTCCGAAGCACAACCCTTGGTTTCCAAGCAGTCACTCAGAAGGCACTTGTTGCCCGTGGAAGCTTTAGTTACTCCAACAGCTCAGGATGTTTCTGATACACCTCTTATTGGTGATGATAAGATTGGAGTGTTATTGTTAAACCTTGGAGGCCCAGAGACTCTAGAAGATGTGCAGCCTTTTCTGTTTAATCTTTTTGCTGACCCAGATATTATACGATTGCCAAGGTTATTTAGTTTTCTTCAAAAGCCACTGGCCCAATTTGTATCTGTTTTAAGAGCACCGAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGATCTCCTCTTAGACGTATGACTGATGCACAGTTTTGGGAAGTGGAAGACAAGCTGACGGCAAAAGAAAAAAAGAAAAAGAAAAATGCTGAAGAGTTGAGGAAGTCTCTTTGGGCAAAGAATGTTCCAGCCAAAGTGTATGTTGGCATGCGTTACTGGCATCCGTTCACTGAAGAAGCTATTGAACAGATAAAAAGGGATGGCATTACCAAGCTTGTTGTACTTCCACTTTATCCGCAATTTTCAATATCAACCAGCGGTTCAAGTCTACGTCTCTTGGAGAGTATATTCCGAGAGGATGAATATCTAGTCAACATGCAGCATACAGTAATACCTTCATGGTACCAGCGTGAAGGATACATAAAGGCCATGGCAAATTTGATTGAAAAAGAGCTGAAAAGCTTCGACTGCCCTGAGGAGGTCATGATATTCTTCAGCGCGCATGGGGTGCCTCTTGCTTATGTAGAAGAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTAGATTTGATCATGGAGGAACTCGAGAAAAGAAAGATAACTAATCCATACACCCTTGCTTATCAGAGTAGAGTTGGACCTGTTGAATGGTTAAAACCCTATACAGATGATACAATAGTTGAACTTGGGAAAAAGGGAGTAAAAAGTCTGCTGGCTGTACCAATAAGCTTTGTCAGTGAGCATATTGAAACCCTAGAAGAAATTGATGTAGAGTACAAAGAATTGGCTCTAAACTCTGGTATAGAAAAATGGGGTCGAGTTCCTGCTCTTGGATGTGAACCCACCTTCATTTCAGATTTGGCAGATGCTGTAATCGAGAGTCTTCCGTACGTTGGTGCAATGGCAGTTTCAAACCTCGAAGCTCGACAGTCATTAGTTCCCCTAGGCAGTGTAGAAGAGTTATTGGCAGCATATGACTCACAGCGGAGGGAGTTGCCACCACCGGTACTGGTGTGGGAATGGGGTTGGACTAAAAGTGCCGAAACCTGGAATGGAAGAGCTGCCATGCTGGCTGTGCTGCTTCTGTTGTTCTTAGAAGTCACTACTGGTGAGGGGTTTCTTCACCAGTGGGGAATATTGCCCTTGTTTAGGTGA 1647 0.4438 MNSPIRVPSTPSSSSCSYIRPPPCLTDASCNFKFPLLLPQAICTSQKMYRCSGGQVGASTNTNPLKNYVVSRCSPEWSEAQPLVSKQSLRRHLLPVEALVTPTAQDVSDTPLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRLFSFLQKPLAQFVSVLRAPKSKEGYASIGGGSPLRRMTDAQFWEVEDKLTAKEKKKKKNAEELRKSLWAKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKSFDCPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNPYTLAYQSRVGPVEWLKPYTDDTIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALNSGIEKWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEELLAAYDSQRRELPPPVLVWEWGWTKSAETWNGRAAMLAVLLLLFLEVTTGEGFLHQWGILPLFR* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2601 548 PANTHER FERROCHELATASE 62 469 IPR001015 GO:0004325|GO:0006783
Dod04g2601 548 Coils Coil 198 218 - -
Dod04g2601 548 CDD Ferrochelatase_C 304 442 IPR033644 -
Dod04g2601 548 TIGRFAM hemH: ferrochelatase 116 459 IPR001015 GO:0004325|GO:0006783
Dod04g2601 548 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 62 469 - -
Dod04g2601 548 Hamap Coproporphyrin III ferrochelatase [cpfC]. 116 459 IPR001015 GO:0004325|GO:0006783
Dod04g2601 548 ProSitePatterns Ferrochelatase signature. 325 346 IPR019772 GO:0004325|GO:0006783
Dod04g2601 548 SUPERFAMILY Chlorophyll a-b binding protein 503 543 - -
Dod04g2601 548 SUPERFAMILY Chelatase 116 465 - -
Dod04g2601 548 Gene3D - 117 458 - -
Dod04g2601 548 Pfam Ferrochelatase 117 458 IPR001015 GO:0004325|GO:0006783
Dod04g2601 548 CDD Ferrochelatase_N 118 298 IPR033659 -
Dod04g2601 548 Gene3D - 297 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2601 Dod-Chr4 49916594 49922410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2601 K01772 - gmx:100803481 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2601 04 49916594 49922410 Dod04g2601 04 49916594 49922410 ECH
Dod04g2601 04 49916594 49922410 Dod09g0038 09 637507 643263 PCT