Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2555 ATGGCTACAGCGGCGCTCTTCACACTCCATCTTTGTCGTTTTGGACGAAATTTATTTTCTGCTTCCTTTTCTCCCACTCGTCTGAACTCTCGCCACGTCACATTCCGACGCAACTTTCGCTGCCGACACTACTTCTCCGGCTCCGCTTTCTCAAGGCGCTTCTCCGCCGTCGCTGCCTCTGGAGAGGTGAATTGTGAAACCGGAATAGCAGATGAAAAGTATGACGTGATTGTGGTCGGAGGAGGACACGCAGGGTGCGAAGCCGCCCTTGCCTCTGCACGTTTGGGGGCGAGAACTCTTCTTCTTACTCTCAATATTGACCGGATTGCGTGGCAGCCTTGCAATCCAGCAGTTGGTGGGCCTGCAAAGTCCCAGCTGGTTCACGAAGTGGATGCGCTAGGTGGTGAAATAGGGAAGATTGCTGATAGATGTTACTTACAGAAGCGTGTACTCAATGTCTCAAGAGGCCCTGCAGTTCGTGCATTACGAGCTCAGACTGATAAAAGAGAATATGCCTTGCAAATGAAAAGCGTAGTAGAAAGCACTCCAAATCTTTCTATTCGAGAGGCTATGGTCACAGATATTTTACTGGGGAAGAATGATAACGTGGAAGGTGTTTGTACATTTTTTGGGATGAAATTCTATGCTCCATCTGTTATTCTCACAACAGGAACTTTTATGAGTGGAAAAATATGGGTTGGTAGAACTTCTATGCCTGCAGGAAGAGCTGGTGAGTCTGCTTCACATGGATTAACTGAGAACTTGCAGCGTCTTGGTTTTGAAACTGATCGGTTGAAAACTGGAACCCCAGCCCGAGTGGACATTCGCACTGTAAATTTCTCAGGATTAGAGCCTCAGCATGGAGATGAAGAGGTCAGCTGGTTTAGTTTTGATCCTGACGTCCATATTGAAAGAGAACAGATGTGCTGCTACCTAACCCGTACTACAAGTAGGACTCACCAGATAATAAGAGATAACTTACATGAAACTCCCACTTATGGAGGATGGGTTGAAGCTAAAGGACCAAGATACTGCCCATCCATCGAAGATAAGATTGTTAGGTTCCAAGATAAAGAGTCCCATCAAATATTTCTTGAACCTGAGGGTCGGAGTGTGCCTGAGCTCTATGTGCAGGGGTTCTCAACAGGTTTGCCAGAGCGATTACAATTACCTTTGCTGAGAACTTTGCCTGGACTTGAAAACTGTTCAATGTTGAGGCCTGCATATGCTGTAGAGTATGATTATTTACCTGCTCATCAATGCGGTAGGTCTCTTATGACAAAGAAAATACAAGGGTTATTCTTCTCTGGTCAGATAAATGGAACTACAGGGTATGAGGAAGCTGCAGCACAGGGTGTTATTTCTGGTATCAATGCGGCTAGATATGCTGATGGTAAGCCACTCATTGTTCTTGAGAGGGAGAGCAGCTATATAGGAACATTAATTGATGATCTAGTTACCAAGGATCTGCGAGAGCCTTACCGCATGTTAACAAGCCGCTCAGAGCATCGGTTACTCTTGAGATCTGATAATGCTGATAGCCGTCTCACTCCCTTGAGTCATGAAATTGGGTTGATAGATGATAGACGTTGGAAACTGTACCAGGAGAAGCAGGCTCGTATTTCTGAGGAGAAGAAGCGATTGAAAAGTGTCAGGATTACAGGAGGGGATTTGGCTGCTGAAGTTGCTCTTCTCTCTGGTCAGCCAGTCAAGGACTCTTCAACATTGGAAAGTCTTCTTAAGAAACCACACATACAATATGGAATTCTTGATAAGCATGGTTTCAGTAACAAAAACTTATCAAGAATGGAGAAAGAATGTGTTGAGATTGACATTAAGTATGAAGGTTTCATCTTGCGTCAGCAAAGCCAACTTCAACAGATGGTTAATCAACAACATAGACCACTTCCTGAAGACTTGGATTACCATGCAATGACAACGTTGTCTCTTGAAGCACGAGAAAAACTTTCCAAGGTTAGGCCTCAAACCATTGGTCAGGCAAGCAGAGTAGGTGGGGTGAGCCCTGCTGACATTACTGCATTACTCATTGTGCTCGAAGCCAATCGAAGAAGAGCTCAAGAACTCAGCAGATACAAAATGATGAATGCTATTCGAGGGAAAACCCAAGATGAGGAGACCGAAGTTTCTTGGACTGAAACAGTCGGCTCTGGTTAA 2175 0.4501 MATAALFTLHLCRFGRNLFSASFSPTRLNSRHVTFRRNFRCRHYFSGSAFSRRFSAVAASGEVNCETGIADEKYDVIVVGGGHAGCEAALASARLGARTLLLTLNIDRIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKIADRCYLQKRVLNVSRGPAVRALRAQTDKREYALQMKSVVESTPNLSIREAMVTDILLGKNDNVEGVCTFFGMKFYAPSVILTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGTPARVDIRTVNFSGLEPQHGDEEVSWFSFDPDVHIEREQMCCYLTRTTSRTHQIIRDNLHETPTYGGWVEAKGPRYCPSIEDKIVRFQDKESHQIFLEPEGRSVPELYVQGFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYDYLPAHQCGRSLMTKKIQGLFFSGQINGTTGYEEAAAQGVISGINAARYADGKPLIVLERESSYIGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLSHEIGLIDDRRWKLYQEKQARISEEKKRLKSVRITGGDLAAEVALLSGQPVKDSSTLESLLKKPHIQYGILDKHGFSNKNLSRMEKECVEIDIKYEGFILRQQSQLQQMVNQQHRPLPEDLDYHAMTTLSLEAREKLSKVRPQTIGQASRVGGVSPADITALLIVLEANRRRAQELSRYKMMNAIRGKTQDEETEVSWTETVGSG* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2555 724 Gene3D - 67 293 IPR036188 -
Dod04g2555 724 Gene3D - 382 526 IPR036188 -
Dod04g2555 724 ProSitePatterns Glucose inhibited division protein A family signature 1. 341 355 IPR020595 -
Dod04g2555 724 PANTHER GLUCOSE INHIBITED DIVISION PROTEIN A 61 692 IPR002218 GO:0008033|GO:0050660
Dod04g2555 724 Hamap tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 72 690 IPR004416 GO:0002098
Dod04g2555 724 SMART GIDA_assoc_3_2 612 683 - -
Dod04g2555 724 Gene3D - 636 686 IPR044920 -
Dod04g2555 724 PRINTS Pyridine nucleotide disulphide reductase class-I signature 219 228 - -
Dod04g2555 724 PRINTS Pyridine nucleotide disulphide reductase class-I signature 75 97 - -
Dod04g2555 724 Pfam Glucose inhibited division protein A 75 466 IPR040131 -
Dod04g2555 724 Pfam tRNA modifying enzyme MnmG/GidA C-terminal domain 470 682 IPR026904 -
Dod04g2555 724 SUPERFAMILY FAD/NAD(P)-binding domain 72 328 IPR036188 -
Dod04g2555 724 Coils Coil 534 554 - -
Dod04g2555 724 PANTHER PROTEIN MTO1 HOMOLOG, MITOCHONDRIAL 61 692 IPR004416 GO:0002098
Dod04g2555 724 Gene3D - 527 616 - -
Dod04g2555 724 TIGRFAM gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 74 687 IPR004416 GO:0002098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2555 Dod-Chr4 49461390 49467987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2555 K03495 - gmx:100791841 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2555 04 49461390 49467987 Dod04g2555 04 49461390 49467987 ECH