Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2552 ATGGTCTCCTTTGTAGTTGTACACAAAAAGCATCCTTCATACATAGTTCGGTTTGGAAAACTTGTCCCTCCCAATATATTTATTTTCCTTCCAATGGAATCAACGGCAGCCACTCTTGTGCACTCTCCTCTACCAAAGGTGCTCAAGGACGAAAATGGGGCCCTGATTTTCGACTCAAAACTGATGCGAAAAGAGGCACACATACCCAAAGAGTTTGTGTGGCCATCTGGGGACTTAGTCAAGACCGCAAAAGAGGAGCTTCACGAGCCTCTTGTGGACATAGGGGTGATGAAGGCGGGTGGTGGCGGTGGTGATGATGATGATGATGCCGCTATTGCAAGAGCCGCTGAGCTTGTGAGGGAGGCATGCGTGAAGCATGGCTTCTTCCAAGTTACGAACCATGGCGTGGACCATGGTCTCATCCATGCCGCATATGAAGAGAGTGACTCCATCTTTCAGCTTCCATTGAGCAGGAAGCTGAGTGCAAGGAGGAGGCCCGGTGGGGTCTCAGGGTACTCGGGTGCACATGCAGACCGGTATTCCACCAAGCTGCCTTGGAAAGAGACGTTTTCTTTCAAGTACGGCCACACCAACAAATCTGACTCACAGATTGTTGACTACTTTAACTCGGTCTTTGGTGATGATCTTCAACATACAGGATATGTGTATCAGGAGTACTGTGAAGCAATGAAGGAGCTCTCTATGGTAATTTTGGAGCTCTTGGCCATAAGCATGGGCATGGATCGTTGGCATTTCCGGACATTTTTCCAAGATGGGGAGTCAATAATGAGGTGCAACTCTTACCCTCCATGCAACAGCTCCAGTCTCACCCTTGGCACCGGCCCTCACAGTGACCCAACCTCATTAACCATTCTTCATCAAGACCAAGTTGGAGGCTTAGAAGTTTGTGTTGATAACAAATGGTTTGCTGTTCGCCCTCGACCTGATGCCTTCGTCATAAATATTGGTGACACTTTCATGGCTTTGTCGAATGGGAAATACAAGAGTTGCCTGCACAGGGCATTGGTTAACAGGGAGGTGGAGAGGAAGTCATTGGTCTACTTTGTGTGCCCAAGAGAAGACAAAACAGTGAAGCCACCGAACAACCTATGTGGCAGTGATGAAGAAAGGAAGTACCCAGATTTCACATGGTCGGATTTGTATGAGTTCACCCAAAAGCATTATAGAGCTGATGTTTCTACCCTTCAAGGTTTCATCCCGTGGTTCCTCGCTAACAAGCCATCAAACTTCTAA 1254 0.4777 MVSFVVVHKKHPSYIVRFGKLVPPNIFIFLPMESTAATLVHSPLPKVLKDENGALIFDSKLMRKEAHIPKEFVWPSGDLVKTAKEELHEPLVDIGVMKAGGGGGDDDDDAAIARAAELVREACVKHGFFQVTNHGVDHGLIHAAYEESDSIFQLPLSRKLSARRRPGGVSGYSGAHADRYSTKLPWKETFSFKYGHTNKSDSQIVDYFNSVFGDDLQHTGYVYQEYCEAMKELSMVILELLAISMGMDRWHFRTFFQDGESIMRCNSYPPCNSSSLTLGTGPHSDPTSLTILHQDQVGGLEVCVDNKWFAVRPRPDAFVINIGDTFMALSNGKYKSCLHRALVNREVERKSLVYFVCPREDKTVKPPNNLCGSDEERKYPDFTWSDLYEFTQKHYRADVSTLQGFIPWFLANKPSNF* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2552 417 PRINTS Isopenicillin N synthase signature 318 344 - -
Dod04g2552 417 PRINTS Isopenicillin N synthase signature 119 136 - -
Dod04g2552 417 PRINTS Isopenicillin N synthase signature 283 304 - -
Dod04g2552 417 Pfam 2OG-Fe(II) oxygenase superfamily 260 358 IPR044861 -
Dod04g2552 417 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 258 358 IPR005123 -
Dod04g2552 417 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 46 412 - -
Dod04g2552 417 Pfam non-haem dioxygenase in morphine synthesis N-terminal 108 199 IPR026992 -
Dod04g2552 417 Gene3D - 58 390 IPR027443 -
Dod04g2552 417 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 46 412 - -
Dod04g2552 417 SUPERFAMILY Clavaminate synthase-like 62 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2552 Dod-Chr4 49385217 49390399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2552 64 396 Glycosyltransferase AT5G59530 27.273 1.79e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2552 K05282 - gmx:100816834 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2552 04 49385217 49390399 Dod04g2552 04 49385217 49390399 ECH