Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2530 ATGGTGAGGTTTTTAGGGTTCACTCGTGGTTACACAGATGAGCCCAGGGAGATCACGACGAGGTCGAACCTCACCAGTGAGTCTGGCGAGAATGGGTGGCTCATCAGGTTCTTTGACTCGGCTTTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGATCACGCAGGGGTGCGTGATTATCTCTGTAATAGAATGTACACTCTTCCCTTGCAGGGGATTGAGAGTTATTTGTTCCAAGTGTGTTACATGATGATATACAAGCCGAGCCCATCCTTGGATAAGTTTGTCATTGACATATGCTCTAAGTCGCTTAAGATTGCTTTGAAGGTACATTGGTTCTTGTTGGCAGAGATTGAGGACTCTGATGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGCCAGATTGCGGCCACCTTGATGGGCGAGTGGCCGCCTCTGATACGGCCTCAAACTGAGCCTTCGAGTTCTGGAGGCAAGAACCCGGTTTTGACCAGGTTACTCTCATCGAAACCTCGTTTTTTGTCGTTGAATTCGTCACCACCTTCGCAGAAGTCTTTATCATCCTCACCTTCCCCTGGAAACAATTTGCATGAGGATGGCAATCCTATGTCTCCTGATGAGAACAAGATATTTAAGAAGTTTATGCCGAGTCCAAAGTTTAGAGATGCTTTGCTTTTCAGGAAGTCGGTGGACAAAGACGATGATGAATCTGAAAGGGATGGGTTTTTCAAGAGGGGCAAGTTTCGTGATGCATTTTCTTTTCGGAAGTCATCCGAGAAAGATGACGAAGACTCTGAAAAGGATAATTTCTTTAAAAGGTTCTTGAGGGACAGTAGGGATAGTAGAGGTGACGATGAGGATTTGACCTCAAGTTCAGAGGGATTTTTTAAGAAATTGTTTCGTGATAACAAGAATGATGGTGAGGATAGAACACACGCTAAAGCAGTGGAAGAGGAAGAGAAAGAGGGATTCTTCCGGAAGATTTTCCGAGAGAAAGTTGAAGATAAGAAGGATGGGACTAATAGGAATGATGATGGAGAAATAGCTAATTCTGAAGAAAAAGGTGCAAAACCAGCTGAAGAAGATGAGAAAGAAGGGTTTTTCCGGAAGATCTTTAAGGATAAATTTGAGGATAAGAAGGACATGAATGATAATAAAGCTGAAGAGGGTACTGCCAATGGTGAGGAAGAAGAGCTTTTTGAGTTTTCCTTGTTCAAAAGACTATTTCGGGTTCACCCAGAAGATGCTAAACGTAGTCCGCCCAATGAAAACAGCAATAAAGGTGGCTTATTTGAAAGTAGTCCAGGTACAGAGAATTTTTTCCGCAGGTTATTCAAAGACCGTGACCGTTCAATTGAAGATTCAGAGCTATTGGGGTCAAAGAGGCAGAAAGAGAAGCATCCTGGATCACCAAAGCAGCAGAGTGAGAAATCGACCACAAAGCCCCCACTACCATTTTGTCCCTCTCAGTTTCGGAAAGGGGCTTATCATGACTCGTTGGAGTTTGTGCAGTCATTATGTGAGACATCATTTGGGTTAGTGGATGTATTTCCAACTGAAGATCGCAAAAATGCTCTGCGTGAGTCACTTGTAGAGATCAATTTACATGTAACAGAGGCTCAGAATACCGGAGGAGTTTGCTTTCCATTGGGAAAGGGCATGTATCGAGTGCTTCATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCACCTTACTTGATCTGTGTTGAAGTTTTGAGATGTGAAATGCCAAGCAATTCCAAGGAGGCATCCAGTTCTCAGAAACTTTCTCAAGGAGGGATTCCTTTGGCAAATGGAGATGCTTTCTTGCAAAAACCACCCCCTTGGGCTTATCCATTACGGACTGCACAAGAGGTGTATCGTAATAGCAATGATAGGATGTCCCAATCGACTGCTCAAGCAATTGATCAGGCAATGACCCATGTATCTGAGGCAAAAAAAAAATTTGTCAGTGTGAATCTTTCTGTGGAAACACAATTACGTGGTAATCCAGGGAAGGGTGTACGTGATGAAGCAGCTAGAGCAGGACATGAAAATGATTTGGAATGGGTACGAATAGTGTTGACAGCGGATCCTGGGGTTAGATTGGAAGATATTGAGGATCAAGCACCACCTCGGAGGAAGGAACATCGCCGCGTTCCAAGTACAGTTGCAATGGAGGAAGTAAAGGCTGCAGCAGCAAAAGGGGAAGCTCCTCTTGGACTCCCTTTGAAAAGTTCTGGTCAAGATTCATCTGACGCACAACCAAGGGCTAATGGCATTACTCCCAAAGCCAGTGATGCATTGTCTGGTGAACTTTGGGAGGCAAAGAGAGAGAGGATTCGAAAGGCTTCTGTATATGGAAAGTTACCTGGTTGGGACTTGCGATCTGTTATTGTGAAGAGTGGTGATGATTGCAGGCAGGAGCATCTGGCTGTTCAACTTATTTCTCACTTTTATGATATTTTCCAAGAAGCTGGTCTACCTCTTTGGTTGCGCCCTTATGAGGTTTTATGCACTTCTTCGTATACAGCTCTGATTGAAACAATTTCTGATACGGCTTCTCTACATTCCATCAAAAGTAGATATCCCAACATCTCAAGTTTACGTGAATTCTTCAATGCCAAGTATCAAGAAAATTCTCCAAGTTTTAAACTTGCCCAGAGGAACTTTGTTGAGAGCATGGCTGGGTATTCCCTGGTGTGCTACCTTCTGCAGGTGAAGGATAGGCATAATGCAAACCTCTTATTGGATGAAGAAGGTCATATCATACATATTGATTTTGGCTTCATGCTGTCCAACTCACCTGGTGGTGTTAACTTTGAAAGTGCACCTTTCAAATTAACCCGAGAGCTTCTTGAGGTCATGGATTCTGATGCTGAGGGCATTCCGAGTGAGTTTTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACTTGCCGCAAGCATGCTGAGCGTATTATTCTTCTTGTTGAGATGTTACAGGATTCAGGCTTCCCGTGCTTTAAAGGTGGTGCAAGGACAATACAGAACTTACGAAAGCGTTTCCATCTCAGTTTAACCGAAGAGCAATGTGTCTCCTTGGTGCTCTCCCTAATTAGCAGTAGTCTAGATGCATGGAGGACGCGGCAGTATGATTATTATCAGAGGGTTTTGAATGGAATATTGTGA 3201 0.4352 MVRFLGFTRGYTDEPREITTRSNLTSESGENGWLIRFFDSAFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGIESYLFQVCYMMIYKPSPSLDKFVIDICSKSLKIALKVHWFLLAEIEDSDDNEGISRIQEKCQIAATLMGEWPPLIRPQTEPSSSGGKNPVLTRLLSSKPRFLSLNSSPPSQKSLSSSPSPGNNLHEDGNPMSPDENKIFKKFMPSPKFRDALLFRKSVDKDDDESERDGFFKRGKFRDAFSFRKSSEKDDEDSEKDNFFKRFLRDSRDSRGDDEDLTSSSEGFFKKLFRDNKNDGEDRTHAKAVEEEEKEGFFRKIFREKVEDKKDGTNRNDDGEIANSEEKGAKPAEEDEKEGFFRKIFKDKFEDKKDMNDNKAEEGTANGEEEELFEFSLFKRLFRVHPEDAKRSPPNENSNKGGLFESSPGTENFFRRLFKDRDRSIEDSELLGSKRQKEKHPGSPKQQSEKSTTKPPLPFCPSQFRKGAYHDSLEFVQSLCETSFGLVDVFPTEDRKNALRESLVEINLHVTEAQNTGGVCFPLGKGMYRVLHIPEDEAVLLNSREKAPYLICVEVLRCEMPSNSKEASSSQKLSQGGIPLANGDAFLQKPPPWAYPLRTAQEVYRNSNDRMSQSTAQAIDQAMTHVSEAKKKFVSVNLSVETQLRGNPGKGVRDEAARAGHENDLEWVRIVLTADPGVRLEDIEDQAPPRRKEHRRVPSTVAMEEVKAAAAKGEAPLGLPLKSSGQDSSDAQPRANGITPKASDALSGELWEAKRERIRKASVYGKLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETISDTASLHSIKSRYPNISSLREFFNAKYQENSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNANLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGARTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2530 1066 PANTHER BNAA02G34040D PROTEIN 6 249 - -
Dod04g2530 1066 PANTHER BNAA02G34040D PROTEIN 251 315 - -
Dod04g2530 1066 PANTHER BNAA02G34040D PROTEIN 284 1066 - -
Dod04g2530 1066 MobiDBLite consensus disorder prediction 417 440 - -
Dod04g2530 1066 PANTHER PHOSPHATIDYLINOSITOL KINASE 6 249 IPR015433 GO:0046854|GO:0048015
Dod04g2530 1066 PANTHER PHOSPHATIDYLINOSITOL KINASE 284 1066 IPR015433 GO:0046854|GO:0048015
Dod04g2530 1066 PANTHER PHOSPHATIDYLINOSITOL KINASE 251 315 IPR015433 GO:0046854|GO:0048015
Dod04g2530 1066 MobiDBLite consensus disorder prediction 383 402 - -
Dod04g2530 1066 MobiDBLite consensus disorder prediction 753 767 - -
Dod04g2530 1066 Gene3D - 46 145 IPR042236 -
Dod04g2530 1066 MobiDBLite consensus disorder prediction 179 202 - -
Dod04g2530 1066 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Dod04g2530 1066 SUPERFAMILY Protein kinase-like (PK-like) 542 1059 IPR011009 -
Dod04g2530 1066 MobiDBLite consensus disorder prediction 744 773 - -
Dod04g2530 1066 CDD PI4Kc_III_beta 774 1066 - -
Dod04g2530 1066 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 902 922 IPR018936 GO:0016301
Dod04g2530 1066 Pfam Phosphatidylinositol 3- and 4-kinase 805 871 IPR000403 -
Dod04g2530 1066 Pfam Phosphatidylinositol 3- and 4-kinase 874 1012 IPR000403 -
Dod04g2530 1066 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 808 822 IPR018936 GO:0016301
Dod04g2530 1066 MobiDBLite consensus disorder prediction 179 215 - -
Dod04g2530 1066 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 783 1051 IPR000403 -
Dod04g2530 1066 SMART pi3k_hr1_6 805 1064 IPR000403 -
Dod04g2530 1066 Gene3D - 730 858 - -
Dod04g2530 1066 MobiDBLite consensus disorder prediction 339 370 - -
Dod04g2530 1066 MobiDBLite consensus disorder prediction 458 488 - -
Dod04g2530 1066 MobiDBLite consensus disorder prediction 458 476 - -
Dod04g2530 1066 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Dod04g2530 1066 Gene3D - 863 1064 IPR036940 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2530 Dod-Chr4 49140420 49149566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2530 1 1065 Lipid Metabolism Gene Families AT5G09350 68.850 0.0 1510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2530 K19801 - gmx:100778394 1739.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2530 04 49140420 49149566 Dod04g2530 04 49140420 49149566 ECH
Dod04g2530 04 49140420 49149566 Dod09g1814 09 39768377 39783764 PCT