Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2528 ATGGGGGTAGATAAACCCATATTCGCTATGGCTGAAAGCAAGAAGAGCAAAGGAAATAAAGATGGGCTTGGCGTTTTATCCGAAACAAGCATATCAGAAACATCTCAGGAGTTTTGCAACCACTCTAAGACCTTTAAGACGTTGGTAGAGATGGACCTGCCATGTAATGAATCTATTGAGGAAAAGCTGTCTTGGCTTCGGTCACAGATCATAGGTAACGATGCTGAGTTTGACTCTCCATTTGGAAGACGAGGACTTGTCTATGCTGATAACACTGCTTCAGGCCGCAGCCTGCACTACAACGAAAACTTTATCATCAAACATGTTCTTCCTTTCTATGGCAACACACACACCTGCGACAGTTACGTGGGAAGTAGAACAACAAAAGTTTTGAATGGAGCAACCGAGTACATCAAGGAATGCTTAGGTGGTGGAGAAGATGATGCAATCATATTCTGTGGTTCAGGTACAACTGCAGCCATCAAGAGGCTCCAAGAAGTCATGGGCATAGCGGTGCCCTCAACCGTGAGGGCAAGGCTGGTAAATAGTCTCATCAACGTGGAAGAAAGATGGGTGGTTTTTGTAGGACCGTATGAGCACCATTCCAACTTGCTTTCATGGCGACAAAGCTTAGCTGAGGTGATTGAGATTGGCCTAGATGACAATGGTTTGTTAGACATGGATTCTCTAAAGCGACAACTTGAGGCATACAAAAATACCAACCGACCCATATTGGGGTCTTTCTCTGCATGTAGCAATGTGACGGGAATCTACTCAGACACACGAGCAATTGCTCAGCTTCTTCACCAATACAATGGCTTTGCATGCTTTGATTTTGCAGCAAGTGGTCCATACGTGGAGATTGACATGAGATCAGGGCAAAGTGATGGGTATGATGCTGTGTTTCTAAGTCCGCATAAGTTCCTTGGTGGCCCTGACTCCCCTGGCGTCCTCCTCATGAACAAGGCATTGTACCAATTAACTTCTTCACCACCATCGATTTGTGGAGGTGGAACTGTGAATTATGTCAATGGCTTCGATGAAAAGGATACAGTATATTTGGAGAACATAGAGGAAAGGGAAAATGCGGGCACGCCTCCAATAACGCAGACAGTGAGAGCAGCATTGGCATTTTGGGTGAAAGAGTATATTGGCTATGAAGAAATTGAGAAACGGGAACAACTCTACATTAACAAGGCACTTGAGAGGCTCAACTCCAACCCAAACATTGATGTTCTAGGAAACACAAGCACCAAACGACAAGCTATATTGTCCTTTGTCGTTTATTCAACCATCAATTCTTTAGAATTAGCATGTTGGGACAATGAGTGGCAAGATGATGATAACAAAGAAAATGATGAGAAGGACCTTAATTTGTGGAGCAAAAGAGGCAAGCTACTTCATGGACCTTTTGTTGCAACATTGCTGAATGACCTCTTTGGAATCCAAGCCCGTGGAGGGTGTGCTTGTGCTGGACCTTATGGCCACCAATTGCTCAATATCAACAAATCTCAATCCCTTGCTGTTAGGTCAGCAATTCAAGAGGGTTATGTTGGAGTAAAACCTGGATGGACTAGAGTTAGTTTTCCTTATTACATGGACGAAGAGGATTTCGAGTTCATTGTGACTGCCATAGAGTTTGTAGCTGCCTATGGCCAACGATTCCTTCGTCTTTACAGCTTCAATTTGAGAAGTGGCAGCTGGAGGGCCAAGGCAGCGACATTTGAAGCTCTAACAAAGGTAAAATATAGCAACTATAGAAAAGCTCTGGAGGAAGCAAGCAGTGATGTCAGTGCAGGGAGTGGACATGATGATGTTGGAGTAAAGCAAGTTGGAATCTTGAGGAAGAAATCTTACCTGGATTTAGCTAAATACATCGCTAGTCGCCTCTCCAAGTTCCCTTCCCAAGGCATATTCAAGGGAAGCGTAGATCCCAATGTTCGCAATTTTAGCATTGTTTTGAAAAGTGGACAGGACCGACTGATTCTTCCAGTTGAACTAATAACTGGTCACGATACCAGTCCAGCATTCTTGCTGATGGAGGTAGAGCACCCCTTGTTTGAAGAGAAACCCGTATTAGCCGAGCCATGCATAGTTCAAACCGAGAGAAGCAATAAGGTCGGTGATGATGAGGTTGGCGTTTTGTCCAAAAAAAATGTATTAGAAACATCTCAGGATTTTTGTAACCACTCTGAGTCCTTTATGGAGCTCGTGGAGATGGGACTGCCGTGTAAAGAGTCCATTGAGGAAAAGTTGTCTTGGCTTCGGTCACAGATTATAGGAAACGATGCCGAGTTCGATTCTCCATTTGGAAGACAAAAAATTCTCTATGCTGATCACACTGCTTCAGGCCGCAGCTTACACTACAATGAAAATTTTATCATCAATCATCTCCTTCCTTTCTATGGTAATACTCACACTTGTGACAGCTATGTGGGAAGCAGGACAACAAAAATGTTGCATGAAGCAAGTGAGTACATTAAGAACTGCTTAGGTGGAGGAGAAGAAGATGCAATCATATTCTGTGGTTCAGGAACAACTGCAGCCGTCAAAAGGCTACAAGAGGTGATGGGAATAGCTGTGCCCTCAACTATGAGGGAAAGGCTATTGAAGGTCCTGAATACAGAAGAAAGATGGGTGGTTTTTGTTGGACCCCATGAGCATCATTCTAACCTCCTTTCTTGGCGGCAAAGCTTGGCTGAGGTGGTAGAGATTGGCCTAGATGATGAGGGTTTGCTGGACATGGATGCTCTTAAGCAACAACTCGAGGCCTATAAACATACCAACCGACCCTTATTGGGATCTTTCTCAGCTTGTAGTAATGTCACGGGAATCTTCTCAGACACTCGAGCAATCGCTCAGCTTCTTCACCAGTACAATGGCTTTGCTTGCTTTGATTTTGCAGCAAGTGGTCCATATGTGGAGATTGACATGAGGTCAGGGGGGGAGAGTGATGGGTATGATGCCGTGTTCCTGAGTCCACACAAGTTTCTTGGTGGTCCTGACTCTTCTGGGGTTCTCCTCATGACCAAGGCACTTTACCATATAGGATCTTCACCACCTTCCACTTGTGGAGGTGGAACTGTGACTTATGTCAATGGTTTCAATGAAAAGGACACATTATATTTGGAGAACATAGAGGAAAGGGAGAGTGGGGGCACCCCTCCAATAATCCAGACAGTGAGAGCAGCGTTGGCATTTTGGGTGAAAGAGTACATTGGCTATGAAGAGATTGAACAACGGGAACAACTATACATCAACAAGGCACTTGAGAGGCTTCTCTCTAACTCCAACATTGAGATTCTTGGAAACACAAGCACCAAACGGCAAGCTATATTGTCATTTCTCATCCACACTAGCACCAATTCTTCTTCCCATGCTTGTTGGAACAATGATGAAAACCAGGAAAATGGAAAGGGACTTAATTTGTGGGCAGAAACTGGGAGCAAAAGAGGTAAGCCACTTCATGGCCCTTTTGTTGCAGCACTTCTCAATGATGTCTTTGGCATCCAAGCTCGTGGAGGGTGTGCTTGTGCTGGACCCTATGGCCAGGAGTTGCTCCATATCAACAAATCTCAATCACTTGCTATTAGATCAGCGGTTCAAGAGCAAAGTCTTTAA 3621 0.4446 MGVDKPIFAMAESKKSKGNKDGLGVLSETSISETSQEFCNHSKTFKTLVEMDLPCNESIEEKLSWLRSQIIGNDAEFDSPFGRRGLVYADNTASGRSLHYNENFIIKHVLPFYGNTHTCDSYVGSRTTKVLNGATEYIKECLGGGEDDAIIFCGSGTTAAIKRLQEVMGIAVPSTVRARLVNSLINVEERWVVFVGPYEHHSNLLSWRQSLAEVIEIGLDDNGLLDMDSLKRQLEAYKNTNRPILGSFSACSNVTGIYSDTRAIAQLLHQYNGFACFDFAASGPYVEIDMRSGQSDGYDAVFLSPHKFLGGPDSPGVLLMNKALYQLTSSPPSICGGGTVNYVNGFDEKDTVYLENIEERENAGTPPITQTVRAALAFWVKEYIGYEEIEKREQLYINKALERLNSNPNIDVLGNTSTKRQAILSFVVYSTINSLELACWDNEWQDDDNKENDEKDLNLWSKRGKLLHGPFVATLLNDLFGIQARGGCACAGPYGHQLLNINKSQSLAVRSAIQEGYVGVKPGWTRVSFPYYMDEEDFEFIVTAIEFVAAYGQRFLRLYSFNLRSGSWRAKAATFEALTKVKYSNYRKALEEASSDVSAGSGHDDVGVKQVGILRKKSYLDLAKYIASRLSKFPSQGIFKGSVDPNVRNFSIVLKSGQDRLILPVELITGHDTSPAFLLMEVEHPLFEEKPVLAEPCIVQTERSNKVGDDEVGVLSKKNVLETSQDFCNHSESFMELVEMGLPCKESIEEKLSWLRSQIIGNDAEFDSPFGRQKILYADHTASGRSLHYNENFIINHLLPFYGNTHTCDSYVGSRTTKMLHEASEYIKNCLGGGEEDAIIFCGSGTTAAVKRLQEVMGIAVPSTMRERLLKVLNTEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGLDDEGLLDMDALKQQLEAYKHTNRPLLGSFSACSNVTGIFSDTRAIAQLLHQYNGFACFDFAASGPYVEIDMRSGGESDGYDAVFLSPHKFLGGPDSSGVLLMTKALYHIGSSPPSTCGGGTVTYVNGFNEKDTLYLENIEERESGGTPPIIQTVRAALAFWVKEYIGYEEIEQREQLYINKALERLLSNSNIEILGNTSTKRQAILSFLIHTSTNSSSHACWNNDENQENGKGLNLWAETGSKRGKPLHGPFVAALLNDVFGIQARGGCACAGPYGQELLHINKSQSLAIRSAVQEQSL* 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2528 1206 PANTHER - 34 650 - -
Dod04g2528 1206 PANTHER CYSTEINE DESULFURASE 34 650 - -
Dod04g2528 1206 PANTHER CYSTEINE DESULFURASE 718 1202 - -
Dod04g2528 1206 PANTHER - 718 1202 - -
Dod04g2528 1206 Pfam Aminotransferase class-V 798 1120 IPR000192 -
Dod04g2528 1206 Pfam Aminotransferase class-V 103 431 IPR000192 -
Dod04g2528 1206 SUPERFAMILY PLP-dependent transferases 79 546 IPR015424 -
Dod04g2528 1206 Gene3D Aspartate Aminotransferase, domain 1 1051 1201 IPR015422 GO:0003824
Dod04g2528 1206 Gene3D - 105 338 IPR015421 GO:0003824
Dod04g2528 1206 Gene3D - 794 1023 IPR015421 GO:0003824
Dod04g2528 1206 Gene3D Aspartate Aminotransferase, domain 1 355 552 IPR015422 GO:0003824
Dod04g2528 1206 SUPERFAMILY PLP-dependent transferases 769 1187 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2528 Dod-Chr4 49121122 49129777 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2528 - - gmx:100776921 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2528 04 49121122 49129777 Dod04g2528 04 49121122 49129777 ECH