Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2527 ATGGCTTCAAAGATCTTGTATCTATTTCTCCTCTTTCTAGCTCACCCTCAGCCATACACGTTTGTGAATGGAGATGCCAAATTGATCAAGAAAACCTGCAGGAAGACCAAGCACTTCGACCTATGTTTCTCTTCCCTTAAATCAGATCCGAGTAGCACAAGCGCAGACCCAAAGGGCCTAGCTTTGATCATGGTTGGGATTGGAATGGCCAATGCCACTTCCACTTCTTCATACTTGTCTTCTTTGCTTGGTTCTGCAAACGACAAGACCTTGAAAAGGGTCCTCAAGGAGTGTGCAGACAAGTACACCTATGCCCGTGATGCCCTTCAAGATTCTGCACAGGATTTGGTTGATGAGGCCGTTGAGGCGTATGACTATGCTTACATGCTCGTTACTGCAGCCTCGGATTACCCGAATGTTTGTCACAACTTATTCAAAGGGACTCCTGGTTTGGCTTATCCTCCTGAGCTTGGTCGTAGAGAGGATGGCCTGAAGCAGATTTGTGATGTTGCTTTGGGGATTATTGATAATCTGGATTGGTATTTGCATTAG 552 0.4583 MASKILYLFLLFLAHPQPYTFVNGDAKLIKKTCRKTKHFDLCFSSLKSDPSSTSADPKGLALIMVGIGMANATSTSSYLSSLLGSANDKTLKRVLKECADKYTYARDALQDSAQDLVDEAVEAYDYAYMLVTAASDYPNVCHNLFKGTPGLAYPPELGRREDGLKQICDVALGIIDNLDWYLH* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2527 183 Pfam Plant invertase/pectin methylesterase inhibitor 28 174 IPR006501 GO:0004857
Dod04g2527 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 178 IPR006501 GO:0004857
Dod04g2527 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 178 IPR035513 -
Dod04g2527 183 SMART PMEI_2 24 174 IPR006501 GO:0004857
Dod04g2527 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 178 IPR035513 -
Dod04g2527 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 178 - -
Dod04g2527 183 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 9 178 - -
Dod04g2527 183 CDD PMEI_like 33 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2527 Dod-Chr4 49103762 49105003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2527 - - gmx:100306461 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2527 04 49103762 49105003 Dod04g2527 04 49103762 49105003 ECH