Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2420 ATGTTCATCGAGAGTTTCAAGGTTGAGAGTCCTAACGTGAAGTACACAGAGAGTGAGATTCAGTCCGTGTACAACTACGAAACCACTGAACTTGTTCATGAGAACAGGAATGGAACTTACCAGTGGGTTGTCAAGCCCAAGACCGTTAAATATGAATTTAAAACAGACTCCCATGTCCCTAAACTAGGGGTAATGCTTGTCGGGTGGGGTGGAAACAACGGTTCAACCCTCGCCGGAGGTGTTATTGCTAACCGAGAGGGTATTTCATGGGCAACAAAGGACAAGATTCAACAAGCCAATTACTTTGGCTCGCTGACACAGGCATCAGCCATCAGAGTGGGGTATTTCCACGGAGAGGAAATCTATGCCCCATTCAAGAGCCTGCTTCCAATGGTAAACCCTGATGACATTGTGTTTGGGGGATGGGATATCAGTGACATGAACCTGGCTGATGCGATGGGCAGGGCCAAGGTCTTTGACATCGATCTGCAGAAACAGTTGAGGCCTTACATGGAATCCATGGTTCCACTCCCTGGAATCTATGACCCGGATTTCATTGCCGCAAACCAAGGAGACCGTGCCAACAACGTCATCAAGGGTACAAAGAAAGATCAAGTTCAACAAATCATCCAAGACATTAAGGCGTTTAAGGAAGCCAACAAGGTGGACAAGGTTGTTGTCCTGTGGACTGCCAACACAGAGAGGTACAGCAACGTGGTTGTGGGACTAAACGACACCATGGAAAACCTCTTGGCTGCCTTGGACAGGGATGAAGCTGAGATCTCTCCTTCCACCTTGTTTGCCATTGCTTGTATATTGGAAAATGTTCCTTTCATCAATGGAAGCCCCCAGAACACTTTTGTCCCAGGGCTGATTGATCTGGCCATCAAGAGGAACACCTTGATTGGTGGAGATGACTTTAAGAGTGGCCAGACCAAAATGAAATCTGTGTTAGTGGATTTCCTTGTGGGGGCTGGTATTAAGCCAACATCAATAGTGAGTTACAACCATCTTGGAAACAATGATGGAATGAACCTCTCAGCCCCACAAACCTTCCGCTCCAAAGAAATCTCCAAGAGCAACGTTGTTGATGATATGGTCAACAGCAATGGCATCCTCTATGAGCCTGGAGAACACCCAGACCATGTCGTCGTTATTAAGTATGTGCCTTACGTGGGCGACAGCAAGAGAGCCATGGATGAGTACACTTCGGAGATATTCATGGGCGGAAAGAGCACAGTTGTGCTGCACAACACATGTGAGGATTCCCTATTGGCTGCTCCTATTATCTTGGACTTGGTCCTTCTTGCTGAGCTTAGCACCCGAATCCAGTTCAAAGCTGAACATGAGGGCAAGTTTCACTCATTCCACCCTGTTGCCACCATCCTCAGTTACCTGACCAAGGCCCCTCTTGTTCCACCGGGTACACCAGTGGTGAATGCGTTGTCAAAGCAGCGAGCTATGCTTGAAAATATCCTGAGAGCTTGTGTTGGATTGGCTCCCGAGAACAACATGATCCTTGAGTACAAGTGA 1533 0.4762 MFIESFKVESPNVKYTESEIQSVYNYETTELVHENRNGTYQWVVKPKTVKYEFKTDSHVPKLGVMLVGWGGNNGSTLAGGVIANREGISWATKDKIQQANYFGSLTQASAIRVGYFHGEEIYAPFKSLLPMVNPDDIVFGGWDISDMNLADAMGRAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGDRANNVIKGTKKDQVQQIIQDIKAFKEANKVDKVVVLWTANTERYSNVVVGLNDTMENLLAALDRDEAEISPSTLFAIACILENVPFINGSPQNTFVPGLIDLAIKRNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNGILYEPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTVVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKAEHEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2420 510 Coils Coil 240 260 - -
Dod04g2420 510 PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 510 - -
Dod04g2420 510 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
Dod04g2420 510 PIRSF Myoinositol-ppht_synth 50 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Dod04g2420 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 510 IPR036291 -
Dod04g2420 510 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Dod04g2420 510 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Dod04g2420 510 Gene3D - 1 355 - -
Dod04g2420 510 Gene3D - 382 510 - -
Dod04g2420 510 Pfam Myo-inositol-1-phosphate synthase 62 494 IPR002587 GO:0004512|GO:0006021|GO:0008654
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2420 Dod-Chr4 48036994 48041084 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2420 K01858 - gmx:100800820 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2420 04 48036994 48041084 Dod04g2420 04 48036994 48041084 ECH
Dod04g2420 04 48036994 48041084 Dod04g0456 04 6332988 6337760 PCT