Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2353 ATGGAAGCAGTGGGAGAGAAATGGATACGAATTGTGTCGTGGGTTGTAATTGCAACGACACTAGTTGTTGTCGTTGAGGGTGCGGTGGCAAGTGCGGAGATGTATGGAAATGGAAGAGAGTGCAGTTTCCCGGCCATCTTCAACTTTGGGGACTCGAATTCTGACACGGGTGGCATCTCAGCAGCTTTCGGGCAAGCTCCTCCCCCCAACGGAATCACTTTCTTCCACGCCCCTGCCGGACGCTTCTCCGATGGTCGCCTCATCATCGATTTTATAGCGGAAAGGTTGGGGTTGCCTTATCTGAGTGCTTATTTGGACTCGGTGGGCTCAAGCTTCAGTCATGGAGCCAATTTCGCAACAGCCGGATCCACTGTCAGACCTCAGAACACAACCAGGTCTCAAAGCGGATATAGTCCCATCTCCCTTGACGTTCAGTCTGTTCAGTTCTCTGATTTCAAGACTAGATCCAAACTCTTTCGCAAACGAGGAGGGGTGTTCAAGGAATTGTTGCCCAAATTCGAGTACTTTCCTAGGGCGCTATACACCTTTGACATTGGCCAAAACGATATCACTGCTGGCTACAAACTGAACCTGACCTCAGAGCAAGTCAAGGCATCTGTACCTGATGTATTGACCCAGTTCTCCAATGTCATAAAGAATGTGTATGGGGAAGGTGGAAGGTCGTTTTGGATCCACAACACAGGCCCACTGGGATGCCTACCTTACATGCTGGATCGCTTTCCCTTGAGTGCTGCCCAGATGGACAAGTTTGGGTGTGCCAAACCCTTCAACGAGGTGGCCCAATATTTTAACAGCAAATTGAAAGAAGCAGTTCAGCAACTGAGGGAAGAGCTTCCAGAGGCAGCAATCACCTATGTTGATTTATACACAGTGAAGTACGACCTCATCAGCAATGCCCAAAAATACGTGAAACTCTCTGGTGAAATGAAGTGTTTGGAATGGAAAGGTTTCGCGGATGGGGTGGCAGCATGCTGTGGGCACGGTGGGAAGTACAACTTTAATAACGCAGAGAGATGTGGAGCCACGAAGACAGTGAATGGTAAAAAGATTGTGATAGCCAAATCCTGCAAAGATCCAACGGTGAGGATTATTTGGGATGGGATACATTATACTGAAGCTGCTAATCACTGGATCTTCCAACAAATAGACAATGGCTCCTTTTCAGATCCTCCTGTGCCTTTAAGTATGGCTTGTCATGCTCATGCATCCATCCACCACTATTAA 1245 0.4803 MEAVGEKWIRIVSWVVIATTLVVVVEGAVASAEMYGNGRECSFPAIFNFGDSNSDTGGISAAFGQAPPPNGITFFHAPAGRFSDGRLIIDFIAERLGLPYLSAYLDSVGSSFSHGANFATAGSTVRPQNTTRSQSGYSPISLDVQSVQFSDFKTRSKLFRKRGGVFKELLPKFEYFPRALYTFDIGQNDITAGYKLNLTSEQVKASVPDVLTQFSNVIKNVYGEGGRSFWIHNTGPLGCLPYMLDRFPLSAAQMDKFGCAKPFNEVAQYFNSKLKEAVQQLREELPEAAITYVDLYTVKYDLISNAQKYVKLSGEMKCLEWKGFADGVAACCGHGGKYNFNNAERCGATKTVNGKKIVIAKSCKDPTVRIIWDGIHYTEAANHWIFQQIDNGSFSDPPVPLSMACHAHASIHHY* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2353 414 CDD SGNH_plant_lipase_like 44 393 IPR035669 -
Dod04g2353 414 PANTHER BNAA06G32900D PROTEIN 25 407 - -
Dod04g2353 414 SUPERFAMILY SGNH hydrolase 117 389 - -
Dod04g2353 414 Coils Coil 271 291 - -
Dod04g2353 414 Pfam GDSL-like Lipase/Acylhydrolase 46 389 IPR001087 GO:0016788
Dod04g2353 414 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 25 407 - -
Dod04g2353 414 Gene3D SGNH hydrolase 37 392 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2353 Dod-Chr4 47339674 47342760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2353 44 409 Acyl Lipid Metabolism Gene Families AT4G10950 27.851 7.11e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2353 - - gmx:100803899 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2353 04 47339674 47342760 Dod04g2353 04 47339674 47342760 ECH