Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2001 ATGGCGTTGAATTTCTCTCATAGACCAATTTTTCCGGGTGGTCTGCCTGATGATAATCTGGTTGCGGCGGCAATGAGGATGCAGGAGAAGGATAGTAGTGATGATGGGTTTGGTAAGGGATCATGGCATGATGTTGATTATGGGAGAGATACATGTGATAGGGGTGCCTCCCAGGACAATGTCTCCAATGACATTCTTGATCGTTTGCCTTCTGATCCCTTTGGCATGGACATCAGCTCCACCATTACAGCTGCCATCGCAGGGTGGCTCGAGCATTTGGAGATTGATTATGGTGGATACCCGGGGGCTGAGCTCCGGGCAAGCAACAACAATTACCAGCTGTTTGCTGGGTTGAATTTTATTTGGAATAATGCTATTAGTTTCCACACATTCCCAGCTGGGAATATGTGGGTTGAGGAGAGAACATTGCAGGGGCCGAGTGGATTTGGCGAGCGCTCTTGGAAAGAAGTTGGAGCTCCATCCTGCAGTTTTGATTTTGGATCTGATTGTGACATGGATGATGTGTTGGGTTTTGGCTCTGAATATGAAGATGTGGGGATTGCTAGCCGGTCTGGTGACACGCACATGGATGATGAGAAATGCCTTGGAGGAGATGAACTTGCTCCTCATCCAGCTTTAAGTTTTTGTCTTCATTTTCTGGGAATGTCTGATCTTCTTGTTGTTGAAAGAGTGTGCAAATCTTTGCATTCTACGATTAGAGGTGATCCTCTTTTGTGGAGAAGTATCCACATAGACCAGCCTTTAAATGAGAGGATTACTGATGATGCTCTTCTGCAACTAACCAATAGAGCTCAAGGTAATCTTCAGTGCCTGAGCCTGGTGGAGTGCACTAGGGTTACTGATGATGGTCTGAAGCATGTTCTTGAAGCCAATCCCAAGTTAACCAAGTTGTGTGTTCCTGGTTGTACAAGACTCAGTATTGAAGGCATTGTGAGTATTTTAAAAGCTTTCAAGTCTACGGGTACCCAAGGGATGAAGCATTTACACATAGGTGGCCTTTATGGTGTTACACAACAGCATTTTGAAGAACTGAAGCTCTTGTTGGGCAGTGATAGCCAGGTGCTGCAGCACTCTCACAAACCACACTTTTATCGTAGGGGAAACTTATACCTGCCTTGTGATGATGATCGGGCCATAGATATCGAAGTCTGTCCAAGATGCCAGAATTTAAGGCTTGTATATGATTGTCCAGCAGAGGGTTGTCAAGGGGTGGGTGTGGGTCATGCCACTCAGTGCAGGGCATGTACTCTCTGCATAGCCCGGTGTAGTCAGTGTGGCCGTTGCATTAATGACAGTGAATATGAAGAAACATTTTGTCTGGAATTACTTTGCTCTTCTTGTTCCAAGCAGCAAGTCAAATGTTCGGAAAGGCCAGATAGAAAGGTTGGATCAACCAAGTCAGTTCTCGATGAACAGAGTTAG 1443 0.4567 MALNFSHRPIFPGGLPDDNLVAAAMRMQEKDSSDDGFGKGSWHDVDYGRDTCDRGASQDNVSNDILDRLPSDPFGMDISSTITAAIAGWLEHLEIDYGGYPGAELRASNNNYQLFAGLNFIWNNAISFHTFPAGNMWVEERTLQGPSGFGERSWKEVGAPSCSFDFGSDCDMDDVLGFGSEYEDVGIASRSGDTHMDDEKCLGGDELAPHPALSFCLHFLGMSDLLVVERVCKSLHSTIRGDPLLWRSIHIDQPLNERITDDALLQLTNRAQGNLQCLSLVECTRVTDDGLKHVLEANPKLTKLCVPGCTRLSIEGIVSILKAFKSTGTQGMKHLHIGGLYGVTQQHFEELKLLLGSDSQVLQHSHKPHFYRRGNLYLPCDDDRAIDIEVCPRCQNLRLVYDCPAEGCQGVGVGHATQCRACTLCIARCSQCGRCINDSEYEETFCLELLCSSCSKQQVKCSERPDRKVGSTKSVLDEQS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2001 480 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 1 467 - -
Dod04g2001 480 Gene3D Ribonuclease Inhibitor 209 469 IPR032675 -
Dod04g2001 480 PANTHER F-BOX PROTEIN SKIP14 1 467 - -
Dod04g2001 480 SUPERFAMILY F-box domain 209 251 IPR036047 GO:0005515
Dod04g2001 480 SUPERFAMILY RNI-like 257 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2001 Dod-Chr4 43466048 43469931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2001 - - aip:107632017 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2001 04 43466048 43469931 Dod04g2001 04 43466048 43469931 ECH