Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1982 ATGGGGATAAATTTGCCATGTTCTTTTTCACACCTGCAGACTGGAATAATTTCTCCAAGTAAACTGAGGATGAAGCTTATAGGGCCTCACCATCACAGGAAGAAGGATGGATCCAACAGTAACTCATCCAGAACGTCCCCTTCAAGGCTTGATGATACTGAATTTGTCAATAGCTTACTTCACTCCAAAAATGACAGCCTTGATGATGAAGTTACCTCTCCAAGTTTAGAAGTGATGTCGTTAAAGCCATCCAGTGATGCAGTGCTGGACCAGAGGCAGAGTGACCAGTCTTCTCACGAACCAAAGGAGACTGTGCCTAGGGAAAACGGTGACGCGGGACGTGTAAGGATGCAACATTTTCAGAAGGCTGACAGTGGAAGTTCAAGCGCAATTCACCCTGTAAGGACATCAGAAGATGATAATCTTGATTATGACAGTAATGCTAGTTCATCCAGTTTTGAGTTTGATAAAGGAGAGAGATCAGTGAGCAATCCTGCAACAAGATCCCTATTGAGACCGATTCCTTCTAAGTGGAATGATGCTGAGAAATGGATAATGAACAGGCAAAATGTACAAGTTGGTTACTCAAAAAAGAATGCTCTACAAAACCAAGCAAATCGCTTGCCCACAAGTATGGTGAGGGTGGCTCCGGAGTCTGGTAATTATGACCATAAGCTACCAGCAGGCAAATTGACAGAAACAAAGCGAGTTGATTTCTGTCAACCGGCATCACATATGGGATTTGAGAAATTCTCTTTTGTTCCATCTGAAGCTCATTCAGTTTCAGGTCAAGCACATGGAAGAACTCCAGTGCTGGACTCTTTTCCCCAAAGCAGAGATTTAAAGGAAGTAAAAGAACTAGACTTATCTTGCCCCAGAAGTACAGATGATCATACAGCAATTCCTGGGATTAGATCTGTTGCCATGAGAGATATGGGAACTGAAATGACCCCTGTGCCAAGTCAAGAACCTTCGCGGACTGCTACTCCTGTTGGGTCAGCAACTCCACTGCATAGCCCAACATCTTCAATGCCTTCAACTCCAAGGAGAGGTGCGCCTGCTCCGACACCTTTGGACAGCACAACCGATGAGGATTCACAGCTTCCTGCTGAAAACAGCAAAAAGCCATTGTCTGAAGAAGAAATGAAGCTCAAGACAAGGAGAGAGATTGCAGCCCTTGGAGTGCAGCTTGGTAAGATGAATATTGCTGCATGGGCGAGCAAAGATGAGCAGGAAAAGAAAAAATCTTCTGCTCGGGACACAAATTCAGAAGAACAGGAGAGAATTGAATTTGAAAAACGTGCTGCATTGTGGGAGGAAGCGGAAAAATCTAAACATACTGCAAGATTTAAACGGGAGGAAATCAAAATTCAAGCATGGGAAAGTCAGCAAAAGGCAAAACTAGAAGCAGAAATGAGAAGAATTGAGGCCAAAGTTGAGCAAATGAGAGCTCAGACACATGCAAAGATGGTGAAAAAGATTGCAATGGCGAGGCAAAGATCAGAAGAAAAACGTGCAGCAGCTGAAGCTAGAAAAAATCGGGAAGCAGAAAGAACTGTGGCGCAAGCAGAATTCATACGCCAAACAGGACGAATACCTGCTACCAGTTACATTTGTTGTGGTTGGCTCTAA 1632 0.4393 MGINLPCSFSHLQTGIISPSKLRMKLIGPHHHRKKDGSNSNSSRTSPSRLDDTEFVNSLLHSKNDSLDDEVTSPSLEVMSLKPSSDAVLDQRQSDQSSHEPKETVPRENGDAGRVRMQHFQKADSGSSSAIHPVRTSEDDNLDYDSNASSSSFEFDKGERSVSNPATRSLLRPIPSKWNDAEKWIMNRQNVQVGYSKKNALQNQANRLPTSMVRVAPESGNYDHKLPAGKLTETKRVDFCQPASHMGFEKFSFVPSEAHSVSGQAHGRTPVLDSFPQSRDLKEVKELDLSCPRSTDDHTAIPGIRSVAMRDMGTEMTPVPSQEPSRTATPVGSATPLHSPTSSMPSTPRRGAPAPTPLDSTTDEDSQLPAENSKKPLSEEEMKLKTRREIAALGVQLGKMNIAAWASKDEQEKKKSSARDTNSEEQERIEFEKRAALWEEAEKSKHTARFKREEIKIQAWESQQKAKLEAEMRRIEAKVEQMRAQTHAKMVKKIAMARQRSEEKRAAAEARKNREAERTVAQAEFIRQTGRIPATSYICCGWL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1982 543 MobiDBLite consensus disorder prediction 143 168 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 121 135 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 65 168 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 71 92 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 29 51 - -
Dod04g1982 543 PANTHER REMORIN FAMILY PROTEIN 12 540 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 318 349 - -
Dod04g1982 543 Coils Coil 465 485 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 408 428 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 495 515 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 93 118 - -
Dod04g1982 543 Coils Coil 498 518 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 315 382 - -
Dod04g1982 543 Coils Coil 408 428 - -
Dod04g1982 543 PANTHER OS02G0116800 PROTEIN 12 540 - -
Dod04g1982 543 MobiDBLite consensus disorder prediction 368 382 - -
Dod04g1982 543 Pfam Remorin, C-terminal region 431 534 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1982 Dod-Chr4 43247659 43251516 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1982 - - gmx:100805128 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1982 04 43247659 43251516 Dod04g1982 04 43247659 43251516 ECH