Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1899 ATGGGTTCATTTGAGGATGATGGTGATACACCGCTTGTGGAAGAGGGTCTTCTTCAGAAGGATGAACTGGGCAAGCAATACGCAGGAGATGGCTCAGTTGACTCTGAAGGCAGGCCAGTTCTTAAGCATAACACTGGCAATTGGAGAGCTTGTCCATTTATTCTTGGAAATGAGTGTTGTGAACGTTTGGCTTTTTTCGGCATTTCAACAAATCTTGTTACCTACCTAACCACCAAACTACATGAAGGAAACGCCTCAGCTGCAAGAAATGTCACCATCTGGCAAGGCACTTGTTATCTTACACCTCTCATTGCAGCTGTTGTGGCAGATACTTACTGGGGGAGATACTGGACAATTGCTGTTTTCTCCACTATTTATTTCATGGGGATGTGTATATTGACTCTTTCTGCATCTGTTCCCACATTGAAGCCTGCTGAATGTTTGGGTTCTGTATGCCCTCCAGCCACTCCTGCACAACGTGCAGTGTTCTACTTTGGTCTCTACGTGATTGCACTTGGAACTGGAGGTGTAAAATCATGTGTGTCACCTTTTGGGGCAGATCAGTTTGATGACACTGATCCCAAGGAAAGGGTTAAGAAGGGATCCTATTTCAACTGGTATTACTTTTCTATTTACCTAGGTGCTATTCTATCATGCACCTTGATTGTGTGGATTCAAGACAATGCAGGATGGAGTCTTGGATTTGGCATTCCTGCTTTATTTATGGGATTATCTATTGGAAGCTTCTTTTTAGGTACACCCCTCTATAGGTTTCAAAAACCAGGGGGAAGCCCTATTAAAAGAGTGTGCCAGGTTGTGGTAGCATCCGTCCGAAAGCGGAACCTGGCTGTCCCTGAGGATAGCGGTCTCCTGTACGAGAAATTAGACAAAAGATCTGGAATTAAAGGGAGTAGCAAACTGGAGCATAGTGATGATCTGAGGTTTCTTGATAAAGCGGCTGTAGTGTCTGATGCTGAGATCAAGGGTGCTGACTATTCTAATCAATGGAGACTCTGCAGTGTGGCACAGGTGGAGGAATTGAAAATCTTGATCCGCATGTTTCCAATTTGGGCTACCGGAATTATTTTTTCTGCCGTTTATGCCCAGATGTCAACGTTGTTTGTGGAACAAGGAAGGATGATGGACACGAGTATCGGTTCCTTCAACATACCTCCAGCTTCCCTCTCAACTTTTGATGTGATTAGTGTTGTTTTCTGGGTCCCAGTCTATGACAGGGTGATTGTTCCAATTGCCAAGCAATTTACAGGCCAGGAGAGGGGCTTTTCCATCCTTAAAAGAATGGCCATTGGCCTTTTTATTTCAGTCCTATGCATGTCAGCAGCTGCTGTTGTGGAGATTACGCGTCTGCAGCTCGCGAGGAAGCTTGACCTTGTTGATAAGCCTGTTGCTGTACCCCTTAGTGTATTCTGGCAAACACCTCAATACTTCTTCCTGGGGGCATCAGAGGTATTCACCTTCATTGGGCAGCTTGAGTTCTTCTATGATCAATCTCCAGATGATATGCGGACTTTATGTGCAGCACTACCACTTCTGAGTTTTTCATTGGGGAATTACTTGAGCTCTTTCATGCTTACTGTAGTAACTTGCTTTACTACACAAGGTGGAAACCCAGGATGGATTCCAGATAACTTGAACAAGGGTCATCTTGATTATTTTTTCTGGCTTTTAGCTGGACTTAGCTTCTTAAATATGTTGGTGTACATAGTCGCTGCCAAAAGGTACAAGCTGAAGAAGGCTTTTTAA 1764 0.4416 MGSFEDDGDTPLVEEGLLQKDELGKQYAGDGSVDSEGRPVLKHNTGNWRACPFILGNECCERLAFFGISTNLVTYLTTKLHEGNASAARNVTIWQGTCYLTPLIAAVVADTYWGRYWTIAVFSTIYFMGMCILTLSASVPTLKPAECLGSVCPPATPAQRAVFYFGLYVIALGTGGVKSCVSPFGADQFDDTDPKERVKKGSYFNWYYFSIYLGAILSCTLIVWIQDNAGWSLGFGIPALFMGLSIGSFFLGTPLYRFQKPGGSPIKRVCQVVVASVRKRNLAVPEDSGLLYEKLDKRSGIKGSSKLEHSDDLRFLDKAAVVSDAEIKGADYSNQWRLCSVAQVEELKILIRMFPIWATGIIFSAVYAQMSTLFVEQGRMMDTSIGSFNIPPASLSTFDVISVVFWVPVYDRVIVPIAKQFTGQERGFSILKRMAIGLFISVLCMSAAAVVEITRLQLARKLDLVDKPVAVPLSVFWQTPQYFFLGASEVFTFIGQLEFFYDQSPDDMRTLCAALPLLSFSLGNYLSSFMLTVVTCFTTQGGNPGWIPDNLNKGHLDYFFWLLAGLSFLNMLVYIVAAKRYKLKKAF* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1899 587 PANTHER PROTEIN NRT1/ PTR FAMILY 8.3 35 584 - -
Dod04g1899 587 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 35 584 IPR000109 GO:0016020|GO:0022857|GO:0055085
Dod04g1899 587 SUPERFAMILY MFS general substrate transporter 39 582 IPR036259 -
Dod04g1899 587 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 105 129 IPR018456 GO:0006857|GO:0016020|GO:0022857
Dod04g1899 587 Pfam POT family 116 547 IPR000109 GO:0016020|GO:0022857|GO:0055085
Dod04g1899 587 Gene3D MFS general substrate transporter like domains 20 586 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1899 Dod-Chr4 42043530 42052401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1899 1 586 Organic Solute Cotransporters AT2G02040 69.795 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1899 K14638 - gmx:100782872 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1899 04 42043530 42052401 Dod04g1899 04 42043530 42052401 ECH