Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1677 ATGGAAGCTACACTTAAGTGCAGAAGATACAAAAAGGTTATTACATCTCCAACAAACACTACTGTTCATCGTTGCTATGCTTGCAAAAATATTTGTAGTTCTCAGCCTAGTGGGGAAGCAAAATTTACCTGCAGATGGTGCAAAGCTGAGTGTTTAATGCCTTCAAGAACAAATCCATACCTGTGTTCCATGTGCCATAATGTTAGTAATTCAACTTTGGGACATGAGAAATCAAGGGAAGTGTGTGGAATATGCAGCCAAGTGAAGAAAATTGGAACCAAATTGTTCAAACATGACAGTGCCAGCAAAAATGGGAATTTGCTGAGTAGATCAGGTCCTTCAGTGACCTTTTCCTCATCCTTCCCAAGAAGATATAACAAGCGTGCGGTTATCTGTGGAGTTTCTTACACAAAAAGGAAACTCAGGCTCAAGGGAACCATTAATGACATTAACAACATAAGGGAGCTGCTGATTAAGAATTTTAAGTTTCCAAATGAGTGCATACGAGTCCTCACAGAACAAGAGCAGAATGCCGATTTAATACCAACAAAACACAACATAATGGAGTCCTTAAGGTGGCTTGTGAGGGACTGTCAGGCAGGAGACTCATTGGTCTTTTACTTCTCAGGACACGGTCTGCAACAACCAGATTTCGAAGAAGATGAAATTGATGGGTTTGATGAGGCACTCTGTCCTGTTGATTTTCTGAAGGAAGGAATGATCATTGACAATGACATTAATTCTACCATCGTTTGGCCACTCAAGAATGGTGTCACCCTCCATGCTATTGTTGATTCTTGTCATAGTGGAACCATTCTGGATCTATTGTATGTTTATAATCATGGAAGGGGCATTTGGGAGGATAACAAGCCCCCTTCTAAAGAACCAATCAGAAAACATACAAGTGGTGGGGTGGCAATTTGTCTCAGTGCTTGTGAAGATAGTCAATCAGCTGCTGATAGCACAGTGTTTGGTGGAAAAGGAATGAATGGTGTTCTCACTTACCTTTTCACGAAAACAATCAGAGAACACCCTCAAATAACTTATGGGGGTCTAATAGAAAAGATACATGGTGAAATTAAAAAGATTAACCGAAGTAGATGCCGTAGCAGCATCTTGCAACATATCTTCCACCGTAAAATTGCACAGGATCCTCTTCTCTCATCATCTGCGAAATTTGATGTTTCTACGAAAATATTCACACTGTGA 1209 0.4028 MEATLKCRRYKKVITSPTNTTVHRCYACKNICSSQPSGEAKFTCRWCKAECLMPSRTNPYLCSMCHNVSNSTLGHEKSREVCGICSQVKKIGTKLFKHDSASKNGNLLSRSGPSVTFSSSFPRRYNKRAVICGVSYTKRKLRLKGTINDINNIRELLIKNFKFPNECIRVLTEQEQNADLIPTKHNIMESLRWLVRDCQAGDSLVFYFSGHGLQQPDFEEDEIDGFDEALCPVDFLKEGMIIDNDINSTIVWPLKNGVTLHAIVDSCHSGTILDLLYVYNHGRGIWEDNKPPSKEPIRKHTSGGVAICLSACEDSQSAADSTVFGGKGMNGVLTYLFTKTIREHPQITYGGLIEKIHGEIKKINRSRCRSSILQHIFHRKIAQDPLLSSSAKFDVSTKIFTL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1677 402 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 25 402 - -
Dod04g1677 402 Gene3D - 67 402 - -
Dod04g1677 402 Pfam Caspase domain 127 390 - -
Dod04g1677 402 PANTHER METACASPASE-4 25 402 - -
Dod04g1677 402 SUPERFAMILY Caspase-like 130 354 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1677 Dod-Chr4 39254680 39257225 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1677 K22684 - gmx:100796640 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1677 04 39254680 39257225 Dod03g0182 03 1940768 1942124 PCT