Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1659 ATGTGGGAATCAGAGGGCGAGTCAGCTGCAGGAAGGCAATATGGGGGTGGTGGACTACTCACTTCAAGCAAGCCTGGTCTCAAGATAGAAGGATTTCAGCAAAGAGGCAACTCTTGGTATGTTTCAGCTGATATTCCAAGTGACCTCCTAGTTCAAATCGGTGAAGCTAACTTCCACTTGCACAAGTATCCTCTGCTATCCAGAAGTGGAAAGCTGAACAGAATCATATATGATTCTCGAGACCCTGAATTGAATAAGGTAGTTATGGATGATCTCCCTGGTGGGCCTGAGGCTTTTGAACTTGCAGCCAAGTTCTGCTATGGAGTTGCTGTAGATTTAACAGCAGGCAATATCTCTGGCCTAAGATGTGCTGCTGAGTACCTTGAAATGACTGAGGACCTTGAAGAAGGCAACCTCATATTCAAGACAGAAGCCTTTCTCAGCTATGTGGTCTTGTCTTCATGGAGAGATTCCATAGTAGTGCTGAAGAGCTGTGAGAAGCTCTCTCCATGGGCAGAGAACCTTCAAATTGTGAGAAGGTGCAGTGAGTCCATAGCTTGGAAAGCTTGTGCTAATCCAAAAGGAATAAGGTGGTCATACACTGGAAGACCCCCAAAAGTTTCCAGCCCAAAATGGAATGACATGAAGGACTCAAGCCCCAGCAGGAACCAGCTGGTCCCTCCTGATTGGTGGTTTGAAGATGTTTCAATCCTTAGGATTGATCACTTTGTTAGAGTCATCACTGCCATTAAGGTGAAGGGTATGAGGTTTGAATTGATTGGTGCTGGAATAATGCACTATGCAACCAAGTGGCTACCAGGGTTGATGAATGAAACAGCAGTGCCAGCAGATGAATCAAGCAACTACAGTAACAGTAACAGTAACAGTAGTAGTAGCAGTAGTGGTGGTGGTGGTGGTAGTATCTGGAAAAGTGGACTTCACATGATTGTGGCAGGAACTAGAGATGACACCTCAAGCCTTCAAGCTAAAGACCAAAGGATGATCATTGAGAGCCTCATCAGCATAATTCCACCACAGAAGGACAGTGTCTCGTGCAGCTTCCTTCTTAGGCTCCTGAGAATGGCAAACATGTTGAAGGTTGCACCTGCATTGATCACTGAATTGGAGAAGAGGGTGGGAATGCAGTTTGAGCAGGCTACACTTGCTGATCTCCTAATCCCTTGTTGTAACAAAAGTGAGACTGTGTATGATGTTGATCTTGTTCAGAGGCTATTAGAGCATTTTCTTGTTCAAGAGCAGATCACTGAAAGTTCTAGTCCAAGCAGACAATCCCTTTCTGAGAAGCAGATGGGAAATGCCAAGACAAGAGTGGCAAGGCTTGTTGACAGTTATCTCACAGAGGTGTCCAGAGATAGAAACCTTTCCCTCACAAAGTTTCAGGTTCTTGCAGAAGCTTTGCCTGAGTCGGCTAGGACCTCCGATGATGGACTTTACAGGGCAGTTGACTCCTATCTTAAGGCACATCCAACACTAACTGAGCATGAAAGGAAGCGACTGTGCCGTGTAATGGATTGTCAGAAACTATCCATTGATGCTTGCATGCATGCTGCCCAAAATGAGAGGCTTCCTCTAAGGGTAGTGGTGCAAGTTCTATTCTCTGAACAGGTAAAGATAAGCAATGCACTGGCCAATAGTACTCTGAAAGAAGGTGTTGAATCTCAGTACCAGCCTATGATTACAAACCGGAAAACACTTCTAGAAGGGACACCACAATCATTCCAAGAAGGGTGGACAGCAGCCAAGAAAGACATCAACAAACTGAAATTTGAGCTTGAGAGTGTGAAAACCAAGTATTTGGAGCTTCAAAATGACATGGAAAATTTGCAGAAACAATTTGATAAGATGCTAAAGCAGAAGCACACATCAGCATGGAGCAGTGGGTGGAAGAAACTGAGCAAACTTACAAAAATGACAAATATAGAGAATCATCATGATATTACACCTCAGATTCCAACTCCAGAGGAACAGAACAGAAAGACAACTAGAAGGTGGAGAAACTCAATATCATGA 2031 0.4431 MWESEGESAAGRQYGGGGLLTSSKPGLKIEGFQQRGNSWYVSADIPSDLLVQIGEANFHLHKYPLLSRSGKLNRIIYDSRDPELNKVVMDDLPGGPEAFELAAKFCYGVAVDLTAGNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIVVLKSCEKLSPWAENLQIVRRCSESIAWKACANPKGIRWSYTGRPPKVSSPKWNDMKDSSPSRNQLVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELIGAGIMHYATKWLPGLMNETAVPADESSNYSNSNSNSSSSSSGGGGGSIWKSGLHMIVAGTRDDTSSLQAKDQRMIIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAPALITELEKRVGMQFEQATLADLLIPCCNKSETVYDVDLVQRLLEHFLVQEQITESSSPSRQSLSEKQMGNAKTRVARLVDSYLTEVSRDRNLSLTKFQVLAEALPESARTSDDGLYRAVDSYLKAHPTLTEHERKRLCRVMDCQKLSIDACMHAAQNERLPLRVVVQVLFSEQVKISNALANSTLKEGVESQYQPMITNRKTLLEGTPQSFQEGWTAAKKDINKLKFELESVKTKYLELQNDMENLQKQFDKMLKQKHTSAWSSGWKKLSKLTKMTNIENHHDITPQIPTPEEQNRKTTRRWRNSIS* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1659 676 Pfam NPH3 family 229 520 IPR027356 -
Dod04g1659 676 MobiDBLite consensus disorder prediction 283 305 - -
Dod04g1659 676 ProSiteProfiles BTB domain profile. 47 115 IPR000210 GO:0005515
Dod04g1659 676 SUPERFAMILY POZ domain 38 132 IPR011333 -
Dod04g1659 676 Gene3D Potassium Channel Kv1.1; Chain A 38 139 IPR011333 -
Dod04g1659 676 PANTHER OS12G0117600 PROTEIN 4 676 IPR043454 -
Dod04g1659 676 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 4 676 IPR029959 GO:0016567
Dod04g1659 676 MobiDBLite consensus disorder prediction 651 676 - -
Dod04g1659 676 CDD BTB_POZ_NPY3-like 38 142 - -
Dod04g1659 676 ProSiteProfiles NPH3 domain profile. 229 544 IPR027356 -
Dod04g1659 676 Coils Coil 591 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1659 Dod-Chr4 38918816 38923689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1659 25 621 EF-hand Containing Proteins AT3G44820 36.513 3.73e-129 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1659 - - gmx:100810791 1176.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1659 04 38918816 38923689 Dod04g1659 04 38918816 38923689 ECH