Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1112 ATGGAAGAACAGGACCAGTCCATCTCCTCTTTCTACAACCTAGGGATCCTCGATTCTCTCCCCCAACAGTCCCTCCGCGACATCCTCCGCTCCTACGACGCCTTCTGCGCCGCCACCCACTCCCTCCTAGCCGGCGCCGGCGATCTCTCCGTCGGCGCCGACTTCGTCGAGCACGTTCACGTCCTCTGCAAGCACCGCCTCGATTCCCTCGTCCGGGATCACTTCCTTCGCGTTCTGGAGGAAACGTTTGAGAGAAATGGGGCGGGGAGGTTTTGGCGCCATTTTGAGCCTTACAGTAATGTTGCGGGTTTGAACAAGAATGATGATCTCAATATTGATGAGGATGAGATCCAGGGTGTGTTGTATAATGCTTTGGAAGAGATCACTTTGGAGAAACAGTATCAGGAGAAGTGCCTATTAATGTTGGTCCATGCTCTGCAGTCTTGCAAGGATCAGGTATCAGAGGACATTCATAATTCTGATGCTGAGAGAAATTATCTTACCGCTAAATATCAATGGATTGTCTCTTCCATACTTATGGCTACGCTTCCTAGGAATTTCCCTGTTATACTGCATTGGTATTTTAAAAGAAGATTGGAGGAGTTAAGTACAATGATGGAAGAAGAGTTCAGCAATGATGCCTCTCAAAATAAGGATGGCATGGATCTAGATGAAAAGGGAAAAATATGCAACAAGGCTGGTGAAATGGATGTTGATGAATGCTATAATGACAGTAGGTTCTCGGAAAACAGTAGACTCGTGAACAACATTGGAAAAGTTGTTCTTGATCTAAGAAGTCTTGGATTTACTTCTATGGCTGAAGATGCTTATGCCTCTGCTATATTCTTACTTCTAAAGGCAAAAGTATATAATGTAGCTGGGGATGATTTTAGGAGTTCTGTTTTACGATCTATCAAAAACTGGATACAGGCTGTACCTCTCCAGTTTCTGCATGCCCTTCTTGTCTATCTTGGAGACACTGTTAGTTATGAGAGTACTTCATCAGGTCTCAAATCACCTTTAGCGCCACAACCATCTTCATGCTGTCCAGGAATTGATTCTCCCTCTGAAGGGCTAGTTAGATGGAAGTTGCGGCTGGAGTATTTTGCTTATGAAACACTGCAAGATTTAAGAATATCCAAATTATTTGAAATAATTGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTGGAGTCATTTATTTCAGCACTGCGTTATCGCTTGCTCACTGCAGGTGCATCAACCAATGATATATTGCACCAATATGTTTCGACCATTAAAGCCCTAAGGTCAATAGACCCTGCAGGTGTTTTCCTTGAGGCAGTTGGTGAACCAATAAGGGATTATTTAAGAGGAAGGAGAGATACCATAAAATGCATAGTGACCATGCTGACAGATGGGACTGGTGGAAATTCAAGTGCATCTGGAAATTCAGGAGATAGCCTTCTTGAAGAGTTGAACAGAGATGAAGAAATTCAAGAGGATGTTGGGGTTGATGATGATTTTAACACTGATGATAGGCAAGCATGGATCAATGCTGCACGCTGGCAGCCTGACCCTGTGGAAGCAGATCCACTAAAGGGAAGCAGAAACCAAAGGAAGGTTGACATACTTGGAATGATTGTTGGCATAATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCTGAGAAACTTCTAAATAAATCTGATTATGATATCGACTCAGAGATACGTACTCTAGAACTTCTTAAGATACACTTTGGGGAAAGCAGCCTACAAAAATGTGAGATTATGCTTAATGATCTAATTGGCTCGAAGAGAAGCAACACAAACATAAAAGCTACCATAAGTCAGCCATCTCAGACGAGTGGAGACAATGCATTATCCATGGATATAATGTCTGCCACTATCATATCTTCTAATTTCTGGCCTCCAATACAGGATGAACCCCTTAACCTCCCTGAACCTGTTGACCAGCTCCTCTCCGATTATGCAAGGAGATTTCATGAAATAAAAACCCCTCGTAAGCTACAGTGGAAAAAAAGTCTTGGAACCGTCAAGCTGGAGTTGCAGTTTGAAGATAGGGTAATGCAGTTCACAGTAGCCCCGGTTCATGCATCAATCATTATGCAATTTCAAGATCAAAAGAGTTGGACCTCTAAAAACCTGGCGGCTGCTATTGGAATACCTATGGATGTGTTGAGTCGGAGAATACATTTCTGGATAAGCAAGGGGGTCATTTCAGAGTCGCCAGGGGCAGATTCCTCTGACCATGTATACACCATTATGGAAAGAATGGCTGAGACAAGTAAGAATGGAGGTATTAGTGGTGGCACCCAGGAACTTCTAGGTGGGGATGAGGAAGAAGAGAGATCTGTGGCCTCTGTGGAGAATCAACTTCGTAAGGAGATGACTGTATATGAGAAATTCATCATGGGGATGCTCACAAACTTTGGTAGCATGGCATTAGATCGAATTCACAATACTCTCAAGATGTTTTGCATTGCCGATCCTCCATATGACAAGTCACTCCAACAACTACAAAGCTTTTTATCTGGTCTAGTCTCTGAGGAGAAATTAGAACTTAGAGATGGAATGTACTTTCTAAAGAAGTAG 2658 0.4278 MEEQDQSISSFYNLGILDSLPQQSLRDILRSYDAFCAATHSLLAGAGDLSVGADFVEHVHVLCKHRLDSLVRDHFLRVLEETFERNGAGRFWRHFEPYSNVAGLNKNDDLNIDEDEIQGVLYNALEEITLEKQYQEKCLLMLVHALQSCKDQVSEDIHNSDAERNYLTAKYQWIVSSILMATLPRNFPVILHWYFKRRLEELSTMMEEEFSNDASQNKDGMDLDEKGKICNKAGEMDVDECYNDSRFSENSRLVNNIGKVVLDLRSLGFTSMAEDAYASAIFLLLKAKVYNVAGDDFRSSVLRSIKNWIQAVPLQFLHALLVYLGDTVSYESTSSGLKSPLAPQPSSCCPGIDSPSEGLVRWKLRLEYFAYETLQDLRISKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVESFISALRYRLLTAGASTNDILHQYVSTIKALRSIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMLTDGTGGNSSASGNSGDSLLEELNRDEEIQEDVGVDDDFNTDDRQAWINAARWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRSNTNIKATISQPSQTSGDNALSMDIMSATIISSNFWPPIQDEPLNLPEPVDQLLSDYARRFHEIKTPRKLQWKKSLGTVKLELQFEDRVMQFTVAPVHASIIMQFQDQKSWTSKNLAAAIGIPMDVLSRRIHFWISKGVISESPGADSSDHVYTIMERMAETSKNGGISGGTQELLGGDEEEERSVASVENQLRKEMTVYEKFIMGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1112 885 SMART APC2_2 824 883 IPR014786 -
Dod04g1112 885 Gene3D Cullin; Chain C, Domain 2 644 786 - -
Dod04g1112 885 Pfam Anaphase promoting complex (APC) subunit 2 824 881 IPR014786 -
Dod04g1112 885 SUPERFAMILY Cullin homology domain 531 773 IPR036317 -
Dod04g1112 885 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 17 885 IPR044554 -
Dod04g1112 885 Pfam Cullin family 550 756 IPR001373 GO:0006511|GO:0031625
Dod04g1112 885 Gene3D Cullin Repeats 533 632 - -
Dod04g1112 885 SMART cul_2 552 706 IPR016158 -
Dod04g1112 885 PANTHER BNAC04G32030D PROTEIN 17 885 - -
Dod04g1112 885 ProSiteProfiles Cullin family profile. 556 756 IPR016158 -
Dod04g1112 885 SUPERFAMILY "Winged helix" DNA-binding domain 814 884 IPR036390 -
Dod04g1112 885 MobiDBLite consensus disorder prediction 784 804 - -
Dod04g1112 885 Gene3D - 800 885 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1112 K03349 - gmx:100785428 1516.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1112 04 31641382 31654871 Dod04g1112 04 31641382 31654871 ECH