Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1101 ATGATCAAAACGAAGAAATGGTATGGTGGAGTTGTGATTGTATCCTTATTTATGGTGTTTATACTTCTGCTCCTGAGATATGGGTTCATGAAAAACCCTATTGAGGAAGGTTATCTAGCTATCCCTGTCCCCCTTAACAGTACTAATCCTCTGAAGTGGATTAATCCTGTGGTTCCACCTGTTCGAAATCCAAATGATGCTTCTCAAGTTATTTCTACAGACATTGTAGTATCTAGCCTCTTTTCTAAGAGCAACTTCACCAAAGAAGAGCAACAAGCTATGCAGACATGGAACCAATTGAAATACTTAGTTGATCATACTCAGGGTTTACCTAATGCAGCAGAAGCTATCAAGGAAGCTGCAGGTGCATGGAGTAACCTTGTTTCCTCAATAGAAGAGCAAAGACAAGGTTATACAAATGACAGTTTGAGATGGAAGGAGAAACAATGTCCCCATTTTCTTAATAAGATGAATTCCACCGAACTTGGTAGTAGTAATTACAAGCTACGGTTTCCTTGTGGCCTGACACAGGGTTCTTCCATATCTGTTATTGGCATTCCAAACGGTCTTCTAGGAAATTTCCGGATTGACTTGACTGGAGAACCACTTCCTGGGGAGCCTGATCCTCCTATTATTTTGCACTATAATGTTAGGCCACATGGTGATAAAATCACTGAAGATCCTGTAATTGTCCAAAACACCTGGACAGTAGCTCATGATTGGGGTGCTGAGGAGCGTTGTCCATCCCCTACTCCTGAAAATGTTAAGAAAGTTGACGAGTTGGAGCAGTGCAATAAGATTGTAGGGAAGAACATTAGCCAACTTCCCATGGCTGGCATGCATTCTCACACTTCAAGCAAAGTTTCCACATCGGAAGAACAATCCAAAAACAGGAAATATTTTCCTTTTAAGCAAGGCTATCCATTTGTTGCAACTATTAGAGTGGGATCAGAGGGAATCCAGATGACTGTTGATGGAAAGCACATAACTTCGTTTGCTTTTCGTGAAACTTTGGAGCCATGGCTTGTTAGTGAGATAAGAATTTCAGGAGACCTCCAGTTAATTTCTGTTCTTGCTAGTGGTCTACCCACAGCAGACGATTCAGAGCATATTGCAGATGTAGAATCACTGAAATCTAATCCTATATCTTTGAAGACTCCATTGGATCTCTTCATTGGTGTTTTCTCTACAGCTAACAATTTTAAGCATAGGATGGCTGTTAGAAGAACCTGGATGCAGTACAATGCAGTTCGATCAAATACAACTGCCGTGCGCTTCTTTGTTGGTTTGCATAAAAACCAAATTGTTAATGAGGAGTTGTGGAAAGAAGCACAAACCTATGGAGACATACAGCTGATGCCATTTGTTGACTACTACAGCCTCATCACCTGGAAAACTTTAGCAATATGCATTTTTGGGACGGAGATTGTTTCAGCAAAGTTTGTCATGAAGACAGATGATGATGCATTTGTTCGTGTGGATGAAGTACTAGGCTCTTTGAATAGGATCAATGTGGCTCATGGGTTGCTGTATGGACTAATAAATTCAGATTCCCGACCGCATCGAAGCACTGATAGTAAATGGTACATCAGCCCGGAGGAATGGCCTGAGGCAACTTATCCACCGTGGGCTCATGGTCCAGGCTATGTCGTCTCACATGATATAGCAAGGATGGTGTACAGGAAATACAAGGAAGGCCAATTAAAGATGTTTAAATTAGAAGACGTGGCAATGGGAATATGGATCTCAGAGATGAAGAAGGCAGGGCTAGAAGTTCGTTATGAGAAAGAAGGCAGAGTGTATAATACAGGTTGCAAGGATGGCTATGTGGTTGCGCATTACCAAGGTCCTAGGCAGATGCTTTGTTTGTGGCAGAAACTTGAGGATGGAAAAGGTGCAAGATGCTGTGGTGATAGTAGATGA 1923 0.4176 MIKTKKWYGGVVIVSLFMVFILLLLRYGFMKNPIEEGYLAIPVPLNSTNPLKWINPVVPPVRNPNDASQVISTDIVVSSLFSKSNFTKEEQQAMQTWNQLKYLVDHTQGLPNAAEAIKEAAGAWSNLVSSIEEQRQGYTNDSLRWKEKQCPHFLNKMNSTELGSSNYKLRFPCGLTQGSSISVIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRPHGDKITEDPVIVQNTWTVAHDWGAEERCPSPTPENVKKVDELEQCNKIVGKNISQLPMAGMHSHTSSKVSTSEEQSKNRKYFPFKQGYPFVATIRVGSEGIQMTVDGKHITSFAFRETLEPWLVSEIRISGDLQLISVLASGLPTADDSEHIADVESLKSNPISLKTPLDLFIGVFSTANNFKHRMAVRRTWMQYNAVRSNTTAVRFFVGLHKNQIVNEELWKEAQTYGDIQLMPFVDYYSLITWKTLAICIFGTEIVSAKFVMKTDDDAFVRVDEVLGSLNRINVAHGLLYGLINSDSRPHRSTDSKWYISPEEWPEATYPPWAHGPGYVVSHDIARMVYRKYKEGQLKMFKLEDVAMGIWISEMKKAGLEVRYEKEGRVYNTGCKDGYVVAHYQGPRQMLCLWQKLEDGKGARCCGDSR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1101 640 Pfam Galactosyltransferase 403 586 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dod04g1101 640 SMART Gal_bind_lectin_2 171 359 IPR001079 GO:0030246
Dod04g1101 640 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 167 360 IPR001079 GO:0030246
Dod04g1101 640 SUPERFAMILY Concanavalin A-like lectins/glucanases 167 360 IPR013320 -
Dod04g1101 640 SMART galectin_3 165 360 IPR001079 GO:0030246
Dod04g1101 640 Gene3D - 381 596 - -
Dod04g1101 640 Pfam Galactoside-binding lectin 167 358 IPR001079 GO:0030246
Dod04g1101 640 CDD GLECT 167 357 IPR001079 GO:0030246
Dod04g1101 640 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 67 629 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dod04g1101 640 Gene3D - 158 358 - -
Dod04g1101 640 PANTHER - 67 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1101 Dod-Chr4 31417532 31423472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1101 5 636 Glycosyltransferase AT1G26810 61.934 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1101 K14413 - gmx:100782548 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1101 04 31417532 31423472 Dod04g1101 04 31417532 31423472 ECH