Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1100 ATGGAATCTAAGAGGTCCACCTTGATGAAGCTTCTGCTGCTGCTTCAGTACTTGTCAGTTCTGTGTGTTTCACAGGATTTTGATTTCTTCTACTTTGTTCAGCAGTGGCCTGGATCTTACTGTGACACACAGAACAAATGTTGCTACCCAACAACTGGGAAGCCCGCTGCAGAATTTGGCATTCATGGTCTCTGGCCTAATTACAGAAACGGCTCTTACCCATCTGACTGTGATTCCAACAATCGTTTTCAGCAGTCTCAGATATCAGACCTCACTAGCAGCTTACAGAGGAATTGGCCCTCACTTTCATGCCCAAGCAGCACTGGGGTAGAATTCTGGACCCATGAATGGGAGAAGCATGGCACTTGCTCAGAGTCAGTCCTCAAGCAACACGACTATTTTGAAGCTGCTCTCAGCCTCAAGCAGAGAGCCAACCTCCTCCGAGCCCTTACTAGTGCAGGAATACAACCAGATGGGGGGTTTTATAGCCTAAGCAACATCAGGGGAGCTATAAAGCAAGGAACTGGGTACACCCCATATATTGAGTGCAATGTGGACTCGTCACGTAGGAGCCAGCTTTACCAAGTTTACTTGTGTGTGGACACATCTGCTTCAGACTTCATTGAGTGCCCTGTGTTCCCCACTAATGGAAAATGTGGCTCCGAGATTGAGTTCCCATCTTTCTAG 687 0.476 MESKRSTLMKLLLLLQYLSVLCVSQDFDFFYFVQQWPGSYCDTQNKCCYPTTGKPAAEFGIHGLWPNYRNGSYPSDCDSNNRFQQSQISDLTSSLQRNWPSLSCPSSTGVEFWTHEWEKHGTCSESVLKQHDYFEAALSLKQRANLLRALTSAGIQPDGGFYSLSNIRGAIKQGTGYTPYIECNVDSSRRSQLYQVYLCVDTSASDFIECPVFPTNGKCGSEIEFPSF* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1100 228 Pfam Ribonuclease T2 family 27 210 IPR001568 GO:0003723|GO:0033897
Dod04g1100 228 ProSitePatterns Ribonuclease T2 family histidine active site 1. 59 66 IPR018188 GO:0003723|GO:0033897
Dod04g1100 228 ProSitePatterns Ribonuclease T2 family histidine active site 2. 112 123 IPR033130 -
Dod04g1100 228 PANTHER RIBONUCLEASE T2 7 228 IPR001568 GO:0003723|GO:0033897
Dod04g1100 228 Gene3D - 21 228 IPR036430 GO:0003723|GO:0033897
Dod04g1100 228 PANTHER BNAA02G26660D PROTEIN 7 228 - -
Dod04g1100 228 CDD RNase_T2_euk 27 225 IPR033697 -
Dod04g1100 228 SUPERFAMILY Ribonuclease Rh-like 21 227 IPR036430 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1100 Dod-Chr4 31391129 31393936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1100 K01166 - gmx:100305644 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1100 04 31391129 31393936 Dod04g1100 04 31391129 31393936 ECH