Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1085 ATGGCAAGAGTAGAGGTGCCCCCCAAATTCTACCACTCCCTACTAGGAGCTATTACACCTGGTACGAGATCAAGCTTACATCTACAAGCCTTGATAGGGAAATGGGCAAGTGAAACTAAGAAGCAAAGCATCTGCAAAGGCAGGAAACCTCCTATTGACACCATCTTCATCCTCATCATTCCATCTTCATCACCTACAGATAATCCAATCACAAAAACCAAAGCCACCTGTGCCCCTACAACCTCTATCACTGTCATCACACAACATCACCACCATCATCATCAAATCACAAACCTCTGCTTCTTCCCCTTGTTGGCCCAACCACCACTGAAAAACCCAATTGTCTCCAATGCCGTTGCACCCTTCACTACCTTGCCTCAGCCATCACAAACCACCACACAGCACCCAACCATAGCCACAACAACGACGTCGTATAGAAAGTTGAAACGAAGAACAGTGAAAAGAGCTGGTGGTGCCTGGCATTATAGCAACCAACAAGAGCGAAAATCAGCTTTCGGTGACCGCACAGAGTGGGCTGAAGCAAACTGCAGAATGCCGACGGAGCTGGAAGAACTCGTCGCCTTTCTATCTTCTCCATCGCCACAAATAACAAAGGCTGCCGTTGACATAGTTCGGGGACTAACCGGTTCTGATGAGGGGATGCAGTCCCTCGCCAAATACGCAAACGCTCTGTTGCCGTCGTTGTCTCGACTCTTAACCGCTCCCAAGGAGGTTTCGGAACCCGCTGCTGAAGCTCTCGTGAATCTCTCGCAAGATTCGACTCTGGCGGCGGAGATGGTTCGGAATGGAATGGTCAAAACGGCAATGGAGGTTCTGTATGAGCCGGAATCGAGCATTACTCGTTTGCTCGTGATGCTTTTGGTGAACCTCACTCAGCTTGATGCTGGTACTGCTTCCTTGCTTCAGACAGAAGATGACAAGGTGCACGGGTTGTATGTTATGAAGCTTGTGAGATCGTTTTGTAGAATCGCACATGAAAATCACGATGATCCTTTTGAACATGTTGGTTCAATACTTGTCAACATCTCAAAGCAGCAGGCAGGGAGGCAGCTTCTGCTTGACCCAAAACGGGGTCTCTTAAAGCAGATAATCAGACAATTTGATTCAAGCAGTTCATTGAGAAAGAAAGGGGTCTCTGGGACTATACGCAACTGTTGTTTTGAAGCTGAGAATCAGCTGCAAAATTTGCTTTTGGTATCAGAGTTTCTTTGGCCGGCATTACTTCTTCCAGTAGCTGGCAACAAGATCTACAGTGAGGAAGACAGATCAAAAATGCCACTTGAGCTTGGGACAGCTCTCTCCATTGAACGTGAACCAGTTAGTGATCCAGAAATTCGTGTTCAAGCATTGGAAGCCATGTACTTGATCTCATTGCAGGAGGCAGGTCGAAGAGCCTTTTGGTCTGTAAATGGACCTAGAATAGTACAAATCGGTTATGAAGATGAGGAAGATCCAAAAGTGATGGAGGCGTATGAGCAACTGGGTTCCTTGTTGATTCACAGCAGTGGCGAGGAGCGACCGTCCGGGGAGACCACAAAGTAG 1563 0.476 MARVEVPPKFYHSLLGAITPGTRSSLHLQALIGKWASETKKQSICKGRKPPIDTIFILIIPSSSPTDNPITKTKATCAPTTSITVITQHHHHHHQITNLCFFPLLAQPPLKNPIVSNAVAPFTTLPQPSQTTTQHPTIATTTTSYRKLKRRTVKRAGGAWHYSNQQERKSAFGDRTEWAEANCRMPTELEELVAFLSSPSPQITKAAVDIVRGLTGSDEGMQSLAKYANALLPSLSRLLTAPKEVSEPAAEALVNLSQDSTLAAEMVRNGMVKTAMEVLYEPESSITRLLVMLLVNLTQLDAGTASLLQTEDDKVHGLYVMKLVRSFCRIAHENHDDPFEHVGSILVNISKQQAGRQLLLDPKRGLLKQIIRQFDSSSSLRKKGVSGTIRNCCFEAENQLQNLLLVSEFLWPALLLPVAGNKIYSEEDRSKMPLELGTALSIEREPVSDPEIRVQALEAMYLISLQEAGRRAFWSVNGPRIVQIGYEDEEDPKVMEAYEQLGSLLIHSSGEERPSGETTK* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1085 520 Pfam Domain of unknown function (DUF383) 280 453 IPR007205 -
Dod04g1085 520 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 230 271 IPR000225 GO:0005515
Dod04g1085 520 SUPERFAMILY ARM repeat 188 506 IPR016024 -
Dod04g1085 520 Gene3D - 179 509 IPR011989 -
Dod04g1085 520 Pfam Domain of unknown function (DUF384) 459 512 IPR007206 -
Dod04g1085 520 PANTHER PROTEIN HGH1 HOMOLOG 185 512 IPR039717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1085 - - gmx:100793520 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1085 04 31071962 31091439 Dod04g1085 04 31071962 31091439 ECH