Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1076 ATGGCTGATCCTCAGAAAGCTTGTCCTGGAGATAGGGATATTGAGCAGGCAATTACATCTCTTAAAAAAGGATCATATCTGCTAAAGTACGGGCGAAGAGGGAAGCCAAAATTCTGTCCATTTAGGCTTTCTAATGATGAGTCTTTACTCATATGGTACTCTGGGAAGGAAGAGAAACAGCTTAAGCTCAGTACTGTTTCAAAGATCATTCCAGGGCAGCGAACTGCAACATTTCAGCGGTATCCTCGGCCTGAAAAGGAATATCAGTCATTTTCTCTTATATATAATGATAGGTCCTTGGATTTGATATGTAAGGACAAAGATGAGGCTGAGATCTGGTTTGTTGGTCTAAAGGCATTAGTTGGACAAAGTAACAATCGAAAGTGGAGATTTGAATCGAGGTTTGAAAGTCTGTATTCTGATAGTCCACCTTCTGGCACACGAAGATCTACTCCATCAATTGCACCATTTGTCTGTATCAATGGCTTTCATCGTTTGTTATTTTCATCAAGGCCTGATAAACTATTAGACATTTACAGATTGCTGTAG 549 0.3989 MADPQKACPGDRDIEQAITSLKKGSYLLKYGRRGKPKFCPFRLSNDESLLIWYSGKEEKQLKLSTVSKIIPGQRTATFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEIWFVGLKALVGQSNNRKWRFESRFESLYSDSPPSGTRRSTPSIAPFVCINGFHRLLFSSRPDKLLDIYRLL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1076 182 CDD PH_PLC_plant-like 12 121 - -
Dod04g1076 182 SUPERFAMILY PH domain-like 13 121 - -
Dod04g1076 182 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 13 159 - -
Dod04g1076 182 Pfam Pleckstrin homology domain 15 122 IPR001849 -
Dod04g1076 182 Gene3D - 13 129 IPR011993 -
Dod04g1076 182 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 13 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1076 Dod-Chr4 30942407 30944544 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1076 - - pvu:PHAVU_003G066900g 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1076 04 30942407 30944544 Dod04g1076 04 30942407 30944544 ECH