Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1069 ATGCTGGACGGCCGTTCCTGTGTGATTTCAAGGTTGTCTTACATGACATATCTGCCTGGCTTGGACATCAAAAATGGCAAGCGCCCTTTGGAAATCGATGCCGAGGATGAACCCCATCCTAGGAAGGTTAATAGGAGATTTGATTCTTGCTGCCGAGGCGAGGTCGATCGGATCTTGTTTCATCACCAATCTTATCAGACCGAGGATTCTGTTGTCCAAAAAATGGATGATGATGATGATGACTCCTTCATCCAGCAGCAGAGGAAGGATTTTGAGCCATTGAGTACTTCCCAAAGAGTTGAGAAGGACAGAGCTTTTTCTGTCCAGCTATCAGCTGAACAAGACCAGCAACACACTGGGGACTCCTTGGAGTCAAGTGTGCATCAACCTGATAAGCAGCAGCAGGATCAGCCTGGGGATGATTCATCTGATTCTAGCGTTCAGCAATATGGTGAGCAGCTGCAGGAGCAGCTGCTCGCTGGGGATTTGTTGAATTCCATTGACCAGCAATCTGGTGCGCCGCCATCTGACGATCAGCAAGAGCACCATGCTGGGGATTCATCAGATTCTGGTTCGCTCCTGCCCCGCATGAACCGAGACAGCTCAGTCACATGCCTCAGCCGCTGTTCGAGGTCTGATTATGGATCCCTTGCATCACTGAATAGGAGCTTTCGCAACGTAATCAGAAGTGGTGAACTCTACCGGTGGAGGAGACTGAATGGTATCATAGAACACTGGGTTTATTTTTCCTGTGCCCTCCTTGAATGGGAGGCTTATGATCCGGTTCGCGAAAGGTGGATGCATTTGCCGAGGATGGCTTCTAATGAATGCTTCATGTGTTCAGACAAGGAGTCTTTAGCCGTAGGTACTGAACTTCTTGTATTCGGGAGGGAGCTTAGGTCCCATGTCATTTACAGATATAGTCTTCTGACAAATTCATGGTCATCTGGAATGAGGATGAATGCTCCAAGATGCTTGTTTGGGTCTGCTAGCCTTGGAGAGATTGCAATTTTAGCTGGTGGATGTGATTCGGATGGTCGTATCCTCAACTCTGCTGAACTATACAATTCTGAGAATCAAACATGGGAAACACTTCCAAGCATGAACAAGCCCAGGAAGATGTGCTCGGGGGTATTTATGGATGGAAAGTTTTTTGTTATTGGGGGAATTGGTGGAAAGGATTCTAAACTTCTTACATGTGGCGAGGAGTACAATTTACAAACTAGAACATGGACAGAAATTCCTAACATGTCCCCTGGACGCAGTGCTAGGGGAACCGAGATGCCTGCAGCAGCTGAGGCGCCACCTTTGGTTGCCGTTGTAAATAATGAACTATATGCTGCTGATTATGCTGACATGGAGGTAAAGAAATACGATAAGGACAGAAAATTGTGGCTTACCATTGGGAGACTGCCTGAACGGGCAGTGTCGATGAATGGTTGGGGTCTTGCATTCAGGGCATGTGGAAATAGGCTGATAGTCATCGGTGGGCCTAGGGCTCATGGTGAGGGTTTCATTGAACTCAACTCATGGGTGCCTAGTGAAGGACCTCCACAGTGGAATCTGCTTGCCAGAAAACGGTCTGGTAACTTTGTCTATAATTGTGCTGTGATGGGATGCTGA 1623 0.4763 MLDGRSCVISRLSYMTYLPGLDIKNGKRPLEIDAEDEPHPRKVNRRFDSCCRGEVDRILFHHQSYQTEDSVVQKMDDDDDDSFIQQQRKDFEPLSTSQRVEKDRAFSVQLSAEQDQQHTGDSLESSVHQPDKQQQDQPGDDSSDSSVQQYGEQLQEQLLAGDLLNSIDQQSGAPPSDDQQEHHAGDSSDSGSLLPRMNRDSSVTCLSRCSRSDYGSLASLNRSFRNVIRSGELYRWRRLNGIIEHWVYFSCALLEWEAYDPVRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSDGRILNSAELYNSENQTWETLPSMNKPRKMCSGVFMDGKFFVIGGIGGKDSKLLTCGEEYNLQTRTWTEIPNMSPGRSARGTEMPAAAEAPPLVAVVNNELYAADYADMEVKKYDKDRKLWLTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRAHGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVMGC* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1069 540 Pfam Kelch motif 323 369 IPR006652 GO:0005515
Dod04g1069 540 Pfam Kelch motif 371 418 IPR006652 GO:0005515
Dod04g1069 540 MobiDBLite consensus disorder prediction 167 196 - -
Dod04g1069 540 Gene3D - 247 525 IPR015915 GO:0005515
Dod04g1069 540 SUPERFAMILY Kelch motif 253 537 IPR015915 GO:0005515
Dod04g1069 540 MobiDBLite consensus disorder prediction 108 149 - -
Dod04g1069 540 MobiDBLite consensus disorder prediction 108 133 - -
Dod04g1069 540 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 10 540 - -
Dod04g1069 540 SMART kelc_smart 335 382 IPR006652 GO:0005515
Dod04g1069 540 SMART kelc_smart 291 334 IPR006652 GO:0005515
Dod04g1069 540 SMART kelc_smart 383 431 IPR006652 GO:0005515
Dod04g1069 540 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 10 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1069 Dod-Chr4 30845992 30849142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1069 200 416 EF-hand Containing Proteins AT4G39560 26.697 1.53e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1069 - - gmx:100791897 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1069 04 30845992 30849142 Dod04g1069 04 30845992 30849142 ECH