Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1067 ATGAGTTCTAGTGGATACACTGTAGAAGTTACAAGTTTATCACCAAAAGCTACTGAGAAGGATGTGTATGACTTTTTTGCTTCCTCCGGTGCAATTGAGTATGTTGAAATTGTCAGGTCTGGTGATTATGCCTGTACTGCATATGTGACATTCAAAGATGCATATTCCCAGGAAATTGCTTGCTTGCTCAGTGGAGCAACTATTTTAGATCAAAGTGTATGTATAACTCGCTGGGGGCAGTATGAAGATGATTTTGATTTCTGGAACCGGCCTTCCTATAGCCATGAGGAGGACAGTTCTTCAACTACACTACAAAGCAATCAATTTGTTTCCTCTGCTGGAGAAGCAGTTACTGTGGCACAAGAAGTTGTCAAGACCATGCTCGCGAAAGGATATGTTCTGGGCAAGGATGCATTAGCTAAGGCCAAGGAGTTGGACGAGTCTCATCAGGTTTCTGCCACCGCGACTGCAAAGGTGGCTGAGCTGAGCCAGAGAATTGGCCTCACCGATAAGATATCTGCAGGTGTTGAGGCTGTTAAATCCGTGGATCAAAATTATCATGTATCAGAAACAGCCAAGTCAGCGGCATCTGTGACAGGAAGATCAGTAGCAGCAGCTGCTAACACTGTGGTGAATAGTAGCTATTTTTCAAAGGGTGCCCTGTGGGTTTCAGGTGCTCTAACCAAGGCAGCACAGGTTGCTTCTGATTTGGGTAGTCGAGGGGCTAGGCAGTGA 735 0.4544 MSSSGYTVEVTSLSPKATEKDVYDFFASSGAIEYVEIVRSGDYACTAYVTFKDAYSQEIACLLSGATILDQSVCITRWGQYEDDFDFWNRPSYSHEEDSSSTTLQSNQFVSSAGEAVTVAQEVVKTMLAKGYVLGKDALAKAKELDESHQVSATATAKVAELSQRIGLTDKISAGVEAVKSVDQNYHVSETAKSAASVTGRSVAAAANTVVNSSYFSKGALWVSGALTKAAQVASDLGSRGARQ* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1067 244 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 244 - -
Dod04g1067 244 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 67 IPR000504 GO:0003723
Dod04g1067 244 Gene3D - 1 82 IPR012677 -
Dod04g1067 244 SMART rrm1_1 7 77 IPR000504 GO:0003723
Dod04g1067 244 CDD RRM_Vip1_like 8 76 IPR034360 -
Dod04g1067 244 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 244 - -
Dod04g1067 244 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 80 IPR000504 GO:0003723
Dod04g1067 244 SUPERFAMILY RNA-binding domain, RBD 5 81 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1067 Dod-Chr4 30717649 30721148 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1067 - - gsj:114378905 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1067 04 30717649 30721148 Dod04g1067 04 30717649 30721148 ECH