Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1050 ATGTTCATGTCCAGCACCCTTACCTTAGAACCACTCTTGAACTTCAACACCTGCCACTGCCGCAGAGACACTGCCATTATTCACCGTTCAAAGCCGAAGCCATTGGTGTTCTCATCACCTTCTCCTTCTCTCTCTTCCTCTTCCTACCTCACTCTCTTCCCTTGCAGCAAAACTGCCTCTTTCTCTTACCTTTGCAATTCTCGGCCACCCCACAAGCTCCAATCTCCAAAGTTTGAAACTTTTGCTACAAACACAGATACCCTCGAGTCCCTTAAATATTCTGATGTCTTGTTCAACAAGACTTTCCCTATCAACCGAACTGAATTGTTGGAGGGAAAGATCTTTGTAAGATTGGATCAGGGGAAGGATCTGAGAAATTGGGAGCTTACTGTGGGTTGCAATCTACCCGGGAAATGGATTCTTCACTGGGGAGTTTCCCTTGTAGATGATGTAGGAAGTGAATGGGATCAACCTCCTCGAGATATGATACCCGCAGGATCTGTTCCTATAAAGGACTATGCAATAGAGACACCTTTGAAGGAATCATCTTCATCTGCTGAAGGAGATACATTTCATGAAGTCAAGATTGATCTCAACACCAACAGTGGAATATCAGCAATTAATTTTGTTCTTAAGGATAAGGAAACTGGTGCTTGGTTTCAACACAAAGGCAGAGATTTCAAGGTTCCTCTGGTCAGCTACCTGAAGGAGGATGCTAATATAATTGGACCTAAAAAGCCCTTCAGTTTTTGGCCAGGAGCCTTGGAGCAGATATCTAACATTCTTCTCAATTCGGAAGCAACACATAATAATGTTCAAGATAACAACAGGGAATCCAGCGATCCAAAACCAGAAAATAGTCAACTGGAAGGTTTCTATGTAGAACTTCCTATTACCAAGGAAGTTACTGTCAATAACTCTATCAGCGTCTCCATTAGGAAAGGCTCCGAGACAGCTAAGAATCTTTTATGCTTGGAAACGGATATACCTGGAGATATTCTCCTTCATTGGGGAGTTTGCAGAGATGATTTGAGAAGGTGGGAAGTTCCCCCTGCTCCTCATCCGCCAGAAACAGTAGCATTTAAAGACAGAGCTTTGAGAACTAAATTACAGTCAAGAGACAATGGAAAGGGAAATTCAGTTCAAATCTCTCTGGGCGAAGAATTTTCAGGATTTCTTTTCGTCCTTAAGCTTAAGGAAAATACTTGGTTAAATTACGAGGGAAATGACTTTTACATTCCTCTATCAAGTTCTAGTAGCTCACTTATTGGCAAAAGAGAGGACCAACCAGAAGGTGTGCAGAGGAAGGTGACAGAAGTGGCAAGTCAGGAGGAATCTGCCTCTACGTTTACTGATGGAATAATCAATGATATAAGGCATTTGGTGACAGACATTTCCTCTCAGAAGAGTCAAAAGAAAAAATCCAAAGAAGCACAAGAAAGCATTCTTCAAGAAATTGAAAGACTGGCTGCTGAAGCCTATAGTATCTTCAGAACCACTGTTCCATCAGAGGAAACTGTTGTGGAATCTGAGGCTGCTGTAGAATCGGAGACGCTGGCACTGCCCGAGTTGCCTCCAAAAATACCCTCAGGGACAGGCACAGGGTATGAAATATTATGCCAAGGGTTTAACTGGGAATCTCACAAATCTGGAAGATGGTACTTGGAGCTGAAAGATAAAGCTGCAGAGCTCGCATCATTTGGCTTTACTGTGATTTGGTTACCACCACCTACAGAGTCTGTTTCACCCGAAGGATATATGCCGAAGGATTTATATAATTTAAATTCTAGATATGGAAACCTTGATGAACTGAAGGATGTGGTGAAAAAATTTCATGAAGTTGGAATCAAAACGCTGGGAGATGCTGTTTTAAATCACCGCTGTGCTCACTATAAGAACCAGAATGGTATTTGGAACATATTTGGAGGTCGTCTCAACTGGGATGATCGAGCAGTTGTTGCTGATGATCCACATTTTCAGGGAAGAGGAAACAAGAGTAGTGGAGATAATTTCCACGCTGCTCCAAATATTGATCATTCACAGGAATTCGTGAGAAAGGATCTTAAAGAATGGCTATGCTGGTTAAGGAAAGAAATTGGGTACGATGGGTGGAGGCTTGACTTTGTCAGAGGATTTTGGGGTGGTTATGTGAAGGATTACCTGGAAGCAAGTGAACCTTACTTTGCCGTTGGAGAGTACTGGGATTCTCTCAGTTATACATACGGTGAAATGGATCATAATCAAGATGCACATAGGCAGCGGATCATTGACTGGATTAATGCTACCAGTGGTACTGCAGGTGCATTTGATGTTACGACCAAAGGGATCCTTCACTCTGCATTGGATAGATGTGAATATTGGCGATTGTCAGATCAGAAGGGGAAACCCCCCGGTGTTCTTGGATGGTGGCCATCTCGTGCTGTTACTTTTATCGAAAATCATGACACTGGTTCAACCCAGGGTCATTGGAGATTTCCCAGTGGAAAAGAACTGCAAGGATATGCTTACATTCTTACTCACCCAGGAACCCCATCAGTGTTCTTTGACCACATTTTTTCTCACTATAAAGGCGAAATAGCGTCACTTATCTCTGTCAGGAAACGGAACAAGCTCCACTGCAGGAGTACAGTTAAAATCTGCAAGGCAGAAAGGGATGTTTATGCTGCCATTATAGATGAAAAAGTTGCTATGAAGATTGGACCCGGTCATTTTGAACCCCCTAGTGGATCCCAAAGATGGTCCTCAGCTGTGGAGGGAAGAGACTATAAGATTTGGGAGGCATCATAA 2787 0.4284 MFMSSTLTLEPLLNFNTCHCRRDTAIIHRSKPKPLVFSSPSPSLSSSSYLTLFPCSKTASFSYLCNSRPPHKLQSPKFETFATNTDTLESLKYSDVLFNKTFPINRTELLEGKIFVRLDQGKDLRNWELTVGCNLPGKWILHWGVSLVDDVGSEWDQPPRDMIPAGSVPIKDYAIETPLKESSSSAEGDTFHEVKIDLNTNSGISAINFVLKDKETGAWFQHKGRDFKVPLVSYLKEDANIIGPKKPFSFWPGALEQISNILLNSEATHNNVQDNNRESSDPKPENSQLEGFYVELPITKEVTVNNSISVSIRKGSETAKNLLCLETDIPGDILLHWGVCRDDLRRWEVPPAPHPPETVAFKDRALRTKLQSRDNGKGNSVQISLGEEFSGFLFVLKLKENTWLNYEGNDFYIPLSSSSSSLIGKREDQPEGVQRKVTEVASQEESASTFTDGIINDIRHLVTDISSQKSQKKKSKEAQESILQEIERLAAEAYSIFRTTVPSEETVVESEAAVESETLALPELPPKIPSGTGTGYEILCQGFNWESHKSGRWYLELKDKAAELASFGFTVIWLPPPTESVSPEGYMPKDLYNLNSRYGNLDELKDVVKKFHEVGIKTLGDAVLNHRCAHYKNQNGIWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLCWLRKEIGYDGWRLDFVRGFWGGYVKDYLEASEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINATSGTAGAFDVTTKGILHSALDRCEYWRLSDQKGKPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPSGKELQGYAYILTHPGTPSVFFDHIFSHYKGEIASLISVRKRNKLHCRSTVKICKAERDVYAAIIDEKVAMKIGPGHFEPPSGSQRWSSAVEGRDYKIWEAS* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1050 928 SUPERFAMILY (Trans)glycosidases 535 855 IPR017853 -
Dod04g1050 928 Pfam Alpha amylase, catalytic domain 564 817 IPR006047 GO:0005975
Dod04g1050 928 Coils Coil 472 492 - -
Dod04g1050 928 Gene3D Glycosidases 537 870 - -
Dod04g1050 928 Gene3D - 871 927 IPR013780 -
Dod04g1050 928 PANTHER ALPHA-AMYLASE 99 928 - -
Dod04g1050 928 SUPERFAMILY Glycosyl hydrolase domain 871 926 - -
Dod04g1050 928 SMART alpha-amyl_c2 867 927 IPR012850 GO:0004556|GO:0005509|GO:0005975
Dod04g1050 928 SMART aamy 537 866 IPR006047 GO:0005975
Dod04g1050 928 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 99 928 - -
Dod04g1050 928 CDD AmyAc_arch_bac_plant_AmyA 538 877 - -
Dod04g1050 928 Pfam Alpha-amylase C-terminal beta-sheet domain 868 926 IPR012850 GO:0004556|GO:0005509|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1050 Dod-Chr4 30304370 30318146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1050 82 928 Glycoside Hydrolase AT1G69830 68.860 0.0 1218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1050 K01176 - gmx:100788193 1536.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1050 04 30304370 30318146 Dod04g1050 04 30304370 30318146 ECH