Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1004 GGTGCTGATTATACAAGACCTGTTACATCCTCAAATGGGGTCGCTGAAGGCACTAAAGTTCACAGATACCAAGAAGAATCTGTTGGACAATTCAAAAGTGAAAGAGAAGAGGGTGAGTTATCTCCTAATGGAGACTTTGAAGAGGATAACTTTGCAGTTTATGAGATGCTGGTTTGGAGGCAGTTATTAAAGGGAAGGATGGTGGTGCAAGCCAACAATACCAAAATAGGCATGGGGAAGATGTTTGTGGTGAAGCTAGAGGAGAAAATGATGTTGGGAAAGGACAGTGACAATGCTTCGGAAAATGGTGCTGCTTCTGAAAGCGAGTCTGGTGAAGAGCAGGAGGAGGATGGGGATCATGAACACGATAACAAGGCTGAGAGTGAAGGTGAAGCTGAAGGAATGGCCGATGCCAATGATGTTGAAGGAGATGAAGCCCCATTGCCATTTTCAGAACGCTTTCTTCTCACTGTAAAGCCACTGGCAAAACATGTTCCGCAGGTGTTGCGTGAGAAAGAAAAGAATGTTCGAATTTTTTATGGAAATGATTCCTTCTATGTGCTGTTTAGACTTCAGCAGATATTGTATGAGAGGATACATTCAGCAAAGATTAACTCATCTTCTGCTGAAAGAAAGTGGAGGGCTTCAAATGATACTAGCTCTACTGATCAATATGGCAGGTTCATGAATTCTCTTTACAATTTACTGGATGGTTCTTATGATAATACAAATTTTGAGGATGACTGTCGAGCTATAATTGGAACACAATCATTTGTTTTATTCACATTAGACAAGCTGATATATAAACTTGTTAAACAGCTTCAAGCTGTTGCATCTGATGAGCTGGCTGGCAAGCTTCTTCAACTATATGCACATGAGAAATCAAGAAAACCTGGAAGATTTGTCGATTCAGTTTATCACGATAATGCTCGCGTTCTTCTTCATGATGAGAATATATACCGAATTGAATGTTCACCGGCACCTACCTGTTTGTCCATTCAGCTGATGGACTATGGACATGACAAACCTGAAGTGACTGCTGTGTCATTGGACCCAAAATTTTCAGCCTATCTGCACAATGACTTCCTATCTGTTGTCCCTGATGAAAAGGAGAATTCAGGAGTTTTCTTGAATAGGAACAAACGCAAATATGCCTTAAGTGATGAATTTTCTAGCGAGGCCATGGATGGTTTCCAAGCTACCAATGGTCTGGAGTGTAAGATAGCCTGCAGTTCATCTAAGGTTTCATACGTTTTAGATACTGAAGACTTTTTAGTCCGAACAAGAAGGAAAAGGAGAACCTTTCATCAGAGCAGATCATGCCATGAGATGGCCGTCTCTCCAAAAATTTGTTCAATCAGAGCTCAACGGTACCGCAAATTGTTTTCCATCACCTGA 1398 0.4113 GADYTRPVTSSNGVAEGTKVHRYQEESVGQFKSEREEGELSPNGDFEEDNFAVYEMLVWRQLLKGRMVVQANNTKIGMGKMFVVKLEEKMMLGKDSDNASENGAASESESGEEQEEDGDHEHDNKAESEGEAEGMADANDVEGDEAPLPFSERFLLTVKPLAKHVPQVLREKEKNVRIFYGNDSFYVLFRLQQILYERIHSAKINSSSAERKWRASNDTSSTDQYGRFMNSLYNLLDGSYDNTNFEDDCRAIIGTQSFVLFTLDKLIYKLVKQLQAVASDELAGKLLQLYAHEKSRKPGRFVDSVYHDNARVLLHDENIYRIECSPAPTCLSIQLMDYGHDKPEVTAVSLDPKFSAYLHNDFLSVVPDEKENSGVFLNRNKRKYALSDEFSSEAMDGFQATNGLECKIACSSSKVSYVLDTEDFLVRTRRKRRTFHQSRSCHEMAVSPKICSIRAQRYRKLFSIT* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1004 465 MobiDBLite consensus disorder prediction 1 46 - -
Dod04g1004 465 PANTHER OS08G0339750 PROTEIN 24 448 - -
Dod04g1004 465 MobiDBLite consensus disorder prediction 93 143 - -
Dod04g1004 465 MobiDBLite consensus disorder prediction 118 132 - -
Dod04g1004 465 Pfam C-terminal domain of Sin3a protein 179 425 IPR031693 -
Dod04g1004 465 MobiDBLite consensus disorder prediction 19 40 - -
Dod04g1004 465 MobiDBLite consensus disorder prediction 1 17 - -
Dod04g1004 465 PANTHER SIN3B-RELATED 24 448 IPR039774 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1004 Dod-Chr4 29207229 29209290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1004 K11644 - gmx:100813398 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1004 04 29207229 29209290 Dod04g1004 04 29207229 29209290 ECH