Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0732 ATGTGCGCAGTCCCATTCTCTGTTACTTGTTCAATCCTCCCGGGTTGGCCTCCTTCATCACGCTGCACTTGCTCCCTCCCATTCCCTTCATCTTCTCCCGAAACCACCACCACCACCACCACCACATATTCCATAGCAGCAACCTCCAAAGATGTGTGGACCAGAACATCCCCCTCTTCCTCCCCTTCCAACACCAACAACATCAAACGACGTCGTACACTCAGCAGAACCCAACAACAACAACAACGACGACGACACCAACAACAACATCATCATGATGCGTACTTGGACCACAGCGTGGACATGGACGAGCTCTTAGCATCAATCCGACAAACCGAAAACGAGGAACAGCTCTTCGCCCTCATGTCCCCTTACATCAACAGACAGCTCTCCATCCGCTTCATGGTCACGCTCCTCTCACGTGAGCCTGACTGGCAGCGCTCCCTCGCCCTCCTCGACTGGATCAATGAGAAGGCCCTCTACTCCCCTTCCGTCTTCGCCTACAACGTGGTCATCCGGAACGCCCTCCGCGAAAACCAGCATCAGATCGCACACGGCCTGTTCGACGAAATGCGCCAAAGGGGCCTCGCACCCGACAGATACACTTACTCCACGCTCATCACTTATTTCGGCAAAAGCGGGATGTTCGATTCGTCTTTGTTCTGGCTACAGCAGATGGAGCAGGACAATGTCTCCGGTGACCTTGTTTTGTATAGCAACTTGATTGAGCTCTCGCGGAAGCTTCGCGATTACTCCAAGGCCATTTCCATCTTCATGAGGTTGAAGAGTGCTGGCATTACTCCTGACCTTGTGGCTTATAACTCGATGATCAATGTGTTTGGGAAGGCGAAGTTGTTCCGGGAGGCTCGGGTCCTGATTCAGGAGATGAGGAGCAATGGCGTGCAGCCGGATACCGTGAGCTACTCCACGCTGCTTGTTGTGTATGTTGAGAATCGGAAGTTTGTTGAGGCGCTTTCAGTCTTCAACGAGATGAATGAAGGGAAGTGCCCACTTGATCTCACGACTTGCAATGTCATGGTTGATGTTTATGGCCAGCTTGACATGGCCAAGGAGGCTGACCGGTTGTTTTGGAGCATGAGGAAGATGGGAATTGAGCCCAATGTGGTTAGTTATAATACGCTGTTGAGGGTATACGGTGAGGCTGAGCTGTTTGGGGAAGCCATCCATCTGTTTCGGTTGATGCAGAGGAAGGGTGTGGAGCAGAATGTTGTCACATACAACACCATGATCAAGATCTATGGCAAGTCTCTTGAGCATGAGAAGGCGACGAATCTCATTCAAGAAATGCAGAATAGGGGTATTGAGCCGAATGCCATCACTTATTCGACGATAATATCTATCTGGGGTAAGGCGGGGAAGCTGGACAGAGCGGCCATGTTGTTTCAAAAGTTAAGGAGCTCGGGAGTTGAAATTGATCAGGTTCTTTACCAGACAATGATTGTTGCCTATGAGAGGGTAGGTTTAGTTGCTCATGCTAAGCGTCTGCTTCATGAGCTGAGGCAACCGGATAACATTCCCAGGGAGACTGCGATCACAATTCTTGCTAGGGCTGGTAGAATTGAAGAGGCTACATGGGTCTTCCGGCAGGCTTTTGATGCTGGAGAGGTGAAAGATATATCTGTTTATGGGTGCATGATTGATCTTTTCTCGAGGAACAAAAAGCATGCAAATGTCGTTGAAGTGTTTGAGAAGATGAGGGAGGTGGGATATTTTCCTGATTCCAATGTTATTGCTCTTGTGCTGAATGCTTTTGGAAAGTTGCGTGAATTTGAGAAAGCAAATGCTTTATATAGTGAAATGCAAAAAGAGGGGTGTGTTTTTCCAGATGAAGTTCATTTCCAGATGCTCAGTCTATATGGGGCAAGAAAGGATTTCAAGATGGTAGAGTCATTGTTCGAGAAGCTGGATTCCAATCCCAACATTAACAAGAAGGAGTTGCATCTTGTTGTTGCCAGTATCTATGAAAGAGCAGATAAACTTAATGATGCTTCCCGAATCATGAACAGCATGAATAAAAAAAGCAATTAG 2049 0.4817 MCAVPFSVTCSILPGWPPSSRCTCSLPFPSSSPETTTTTTTTYSIAATSKDVWTRTSPSSSPSNTNNIKRRRTLSRTQQQQQRRRHQQQHHHDAYLDHSVDMDELLASIRQTENEEQLFALMSPYINRQLSIRFMVTLLSREPDWQRSLALLDWINEKALYSPSVFAYNVVIRNALRENQHQIAHGLFDEMRQRGLAPDRYTYSTLITYFGKSGMFDSSLFWLQQMEQDNVSGDLVLYSNLIELSRKLRDYSKAISIFMRLKSAGITPDLVAYNSMINVFGKAKLFREARVLIQEMRSNGVQPDTVSYSTLLVVYVENRKFVEALSVFNEMNEGKCPLDLTTCNVMVDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKGVEQNVVTYNTMIKIYGKSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELRQPDNIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVYGCMIDLFSRNKKHANVVEVFEKMREVGYFPDSNVIALVLNAFGKLREFEKANALYSEMQKEGCVFPDEVHFQMLSLYGARKDFKMVESLFEKLDSNPNINKKELHLVVASIYERADKLNDASRIMNSMNKKSN* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0732 682 Gene3D Tetratricopeptide repeat domain 245 356 IPR011990 GO:0005515
Dod04g0732 682 Gene3D Tetratricopeptide repeat domain 105 244 IPR011990 GO:0005515
Dod04g0732 682 Gene3D Tetratricopeptide repeat domain 519 681 IPR011990 GO:0005515
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 199 233 IPR002885 -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 479 513 IPR002885 -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 234 268 IPR002885 -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 580 614 IPR002885 -
Dod04g0732 682 Pfam PPR repeat family 163 208 IPR002885 -
Dod04g0732 682 Pfam PPR repeat family 339 383 IPR002885 -
Dod04g0732 682 Pfam PPR repeat family 268 312 IPR002885 -
Dod04g0732 682 Pfam PPR repeat family 409 452 IPR002885 -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 444 478 IPR002885 -
Dod04g0732 682 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTIC 40 680 - -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 409 443 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 411 445 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 306 339 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 446 479 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 548 580 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 342 375 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 587 616 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 167 199 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 376 409 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 271 305 IPR002885 -
Dod04g0732 682 TIGRFAM PPR: pentatricopeptide repeat domain 201 234 IPR002885 -
Dod04g0732 682 MobiDBLite consensus disorder prediction 51 75 - -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 304 338 IPR002885 -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 374 408 IPR002885 -
Dod04g0732 682 Gene3D Tetratricopeptide repeat domain 357 518 IPR011990 GO:0005515
Dod04g0732 682 SUPERFAMILY HCP-like 222 479 - -
Dod04g0732 682 Pfam PPR repeat 481 507 IPR002885 -
Dod04g0732 682 Pfam PPR repeat 587 612 IPR002885 -
Dod04g0732 682 Pfam PPR repeat 236 266 IPR002885 -
Dod04g0732 682 Pfam PPR repeat 548 576 IPR002885 -
Dod04g0732 682 PANTHER OS03G0856100 PROTEIN 40 680 - -
Dod04g0732 682 MobiDBLite consensus disorder prediction 51 93 - -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 164 198 IPR002885 -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 269 303 IPR002885 -
Dod04g0732 682 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 339 373 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0732 187 642 Glycosyltransferase AT1G05670 23.043 1.04e-38 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0732 - - jre:109008930 1033.09