Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0728 ATGGTTTCCAAAAGGGTGACTGATGATCTAGCACTCCCCTGCGCCTTATTGCTACTCCTGGTCGGTTTGGCAAGCTCGGATTTGGCCAAAGACAGAGAAGAATGTGCTGACAAACTTGTTGGGCTAGCTAGCTGCATTCCTTATGTTGGTGGTGAAGCCAAGGCCCCCACCATAGACTGCTGCAGTGGCCTCAAAGTGGTCCTTGAAAAGAGCAAGAAATGCATCTGCATCCTCATAAAAGATCGTGATGACCCCAACCTTGGCCTCAAGATCAATGCCACCCTTGCCGTGCAACTACCAAGTGCTTGCCACGCACCGACTAATATATCTCAGTGCGTAGATCTTTTGCATTTGGCACCTAACTCTCCTGATGCTAAGGTGTTTGAGGGGTTTGAAAAATCCACCAAGACCAACAGTTCCGCCCCAGTTTCCAGTGGTAGTGCTGAGAAGGGTACAACCTCATCAGCTGCTCAAGAAAAGAGTGGTGGCGGTTTGGGAAATAGGTGGCTGGTGGCAGAGGTGGTTTGTGGTATTTTACCATTTGTTTTCATTTCCCAGTTCTTCTTTCTCTGA 573 0.4869 MVSKRVTDDLALPCALLLLLVGLASSDLAKDREECADKLVGLASCIPYVGGEAKAPTIDCCSGLKVVLEKSKKCICILIKDRDDPNLGLKINATLAVQLPSACHAPTNISQCVDLLHLAPNSPDAKVFEGFEKSTKTNSSAPVSSGSAEKGTTSSAAQEKSGGGLGNRWLVAEVVCGILPFVFISQFFFL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0728 190 SMART aai_6 35 112 IPR016140 -
Dod04g0728 190 PANTHER PROTEASE INHIBITOR/SEED STORAGE/LTP FAMILY PROTEIN 10 189 - -
Dod04g0728 190 MobiDBLite consensus disorder prediction 133 162 - -
Dod04g0728 190 CDD AAI_LTSS 42 104 - -
Dod04g0728 190 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 189 IPR043325 -
Dod04g0728 190 MobiDBLite consensus disorder prediction 133 161 - -
Dod04g0728 190 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 34 113 IPR036312 -
Dod04g0728 190 Gene3D - 32 112 IPR036312 -
Dod04g0728 190 Pfam Probable lipid transfer 26 112 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0728 Dod-Chr4 12020792 12022177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0728 4 189 Acyl Lipid Metabolism Gene Families AT1G55260 46.561 4.64e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0728 - - pvu:PHAVU_001G268300g 264.618