Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0727 ATGAGTGCAAAGCTTGATTTAACATCTGCAGCTGAACCTCACAAGATGTCTGGACCTTCATCTGCAGCACCTAATAGTGGCCAAAAGCTCTCTATATTTTCTGCGAAATCTGGATTTGTGATCCCTAAAAACAAATTATCAGGTTCATTGGTTCCTGTTTTCCGAGGGGCTAAAAAACATGGTGTTACTGGGGCCATCAATGAAGAAAGTTCCAAACAAATTGAGAGGAAAACAAAATGGGGGCCTGATCTGACACAGGATGCTGCTGTCAAGAGGGCAAAGGCTTTAGCTTTACAGATTCGAGTGGATCAAATTACGAAGCTGTTGGAATCAGAAAAATCAGAAGTTGGAAGTCCCCAGAGTCTGGGTCAAAGCAAACTTGGCCATCAGATTGACAGCAAGAAGTCAGAAATGCTCGAACTTGAAAAGCGGGAAGCAATAGGTGAAATACTAAAGCTAGACCCTAGTTACAAGCCTCCACCTGGTTTTAAACCACTGTTAAAAGAGGCCACTATTCCTTTGCCTATCCAAGAATATCCTGGGTACAATTTCATTGGTCTAATATATGGGCCTGAAGGTAATAATCAAAAGCGACTAGAACAGGAAACTGGTGCAAAGATAAAAGTTCATGGAACCAAAGCTGACACAGGAGAGAAAGGTGAAATTAAACCAGGAACTGATATCAAATGCAGTTACAAAGAGATACATGTTAACATATCAGCTGATAGTTTTGATAAAGTGGATGCAGCTGTGTCCATCATTGAACTACTAATTACCTCTGTAACTGGGAATTTAGCTGCCAGTTCCACACCCTCTGTATCTGGGGATAGCACTAATGTTCTGAGTCAAAGCCAGCATGGGCAACCTTCTCATCCAGTATCTACTGCTCTGGAAAATCAGGTTGTGGCACAACCGATAACTAGTACACAAATGCATGGAGGTCACCTTTACTCGGGTCCATGGTTTTCAGCAGTTCCATCTCATAACCCTGTGTTTCCTTCTTCTGGTAATGTAGCCCCTCAAAATTCATCAGGTCTTGCGAGAACTCCTCTTTTTCCATCACAGACAATGAATCCTTCAAGCATGGCTTCAGCTTTTGGTGCTCAACCTGCACCTGTTGCTGGATTCCACCCAACTATTCCAAATCAACATGTTTCTATGCAAGCACCACCTCCTAGACAGATTTTACAGCATTCACATATGACTCAGGCAAGTCCTGTGGCTGTGGGTCACATTGGCCCCCCAAGAAATCATTTGATATCTGGGAATAATTTTTCAGCTCCAACAAATGCTTCAATTTCGTTTCCAGTTACTTTAAGCCAGCCAACACCAATAGGACACCTCCAGACATCAGTGTCTTCAATGCCTCAACCTATGTCTGGTATATCACCTGCACCAATACCTAACCAGCGATTGACTCCTCTTGGGGACACTTCTGGACAGAATGGCACACCTATCACTGTTAAAGTGTCGTCAGATCTCAGCAACATGAGGCCGATGGCTCTACAGGCGGGTCCACCTACAAGACCTGCGGCTTTTCCTCAATCAAATGTTGCATTTAAGCCCTTACAATCAAATATGTCATTGACGCCACGATCAGCCACTTTTCCTCCACATCAAGTGGGAATTTCCCCTGGACCGCCATCGTCTTTGGGACCAATGCCTCTACCAGTACCTGCACCTACTCATTTATTGGGACCTGTTTCATTTCCTTCGTCTGGAGTTTCCCCTTCACTTCCATTACCTCAGCAATCAGGAATATCTAATCCTGCTTCTGGAGTTGCTCCTTATCACACCCATGTAATGCCACCAGCCTTGACAGCTTCAAATTCAGGGAATTTTACATTTCAATCCCAGCGGCCCAATGCAGATAGTCAAGTGGTTTCCGGACCAAACAGTCAAGCTACTACTCAGGGTGGTACACAAGAGCCTGCTCCTGGTCCACGGCCACCACCATTTGGGTTTTCTGCACCTGATCGACCTTTCCAAACCTTTCCAAGGACCCAAATCCCCAACCAGGTGGATCAAACACAAGCTCATGTGTCTGCTGCCCCATTTGGGGGAAGACCTGGTTCAGTCTCAATTCCTCCCAGACACAATGCATTTCCATATGCTGGTCAACCTGCACCTAGGTCTCCATTCCCACAAATGGGTATGAAGAACTTCATTTCTGCCCCTCAAATGCCAAATTTGCCAAACCCTGGTGTTCCAAGAGGTCAACAAAATTATCCTGCTCAGAAGACATGGCCAGGTATCCCCATGCCTCTGAACCAGAAGTTTGGCAACAATCCTTCCATGGCTTCTGGTAAGCCGGCATATCCTGCGGACCAGATTTATGATCCCTTTTCACCTACTTCTATTCCACCTCCATAG 2373 0.4522 MSAKLDLTSAAEPHKMSGPSSAAPNSGQKLSIFSAKSGFVIPKNKLSGSLVPVFRGAKKHGVTGAINEESSKQIERKTKWGPDLTQDAAVKRAKALALQIRVDQITKLLESEKSEVGSPQSLGQSKLGHQIDSKKSEMLELEKREAIGEILKLDPSYKPPPGFKPLLKEATIPLPIQEYPGYNFIGLIYGPEGNNQKRLEQETGAKIKVHGTKADTGEKGEIKPGTDIKCSYKEIHVNISADSFDKVDAAVSIIELLITSVTGNLAASSTPSVSGDSTNVLSQSQHGQPSHPVSTALENQVVAQPITSTQMHGGHLYSGPWFSAVPSHNPVFPSSGNVAPQNSSGLARTPLFPSQTMNPSSMASAFGAQPAPVAGFHPTIPNQHVSMQAPPPRQILQHSHMTQASPVAVGHIGPPRNHLISGNNFSAPTNASISFPVTLSQPTPIGHLQTSVSSMPQPMSGISPAPIPNQRLTPLGDTSGQNGTPITVKVSSDLSNMRPMALQAGPPTRPAAFPQSNVAFKPLQSNMSLTPRSATFPPHQVGISPGPPSSLGPMPLPVPAPTHLLGPVSFPSSGVSPSLPLPQQSGISNPASGVAPYHTHVMPPALTASNSGNFTFQSQRPNADSQVVSGPNSQATTQGGTQEPAPGPRPPPFGFSAPDRPFQTFPRTQIPNQVDQTQAHVSAAPFGGRPGSVSIPPRHNAFPYAGQPAPRSPFPQMGMKNFISAPQMPNLPNPGVPRGQQNYPAQKTWPGIPMPLNQKFGNNPSMASGKPAYPADQIYDPFSPTSIPPP* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0727 790 MobiDBLite consensus disorder prediction 604 643 - -
Dod04g0727 790 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 23 786 - -
Dod04g0727 790 MobiDBLite consensus disorder prediction 746 790 - -
Dod04g0727 790 SMART kh_6 166 259 IPR004087 GO:0003676
Dod04g0727 790 MobiDBLite consensus disorder prediction 112 131 - -
Dod04g0727 790 Pfam KH domain 183 254 IPR004088 GO:0003723
Dod04g0727 790 MobiDBLite consensus disorder prediction 1 28 - -
Dod04g0727 790 Gene3D K Homology domain, type 1 163 286 IPR036612 GO:0003723
Dod04g0727 790 PANTHER RNA-BINDING PROTEIN RELATED 23 786 IPR045071 -
Dod04g0727 790 MobiDBLite consensus disorder prediction 112 129 - -
Dod04g0727 790 ProSiteProfiles Type-1 KH domain profile. 183 254 - -
Dod04g0727 790 MobiDBLite consensus disorder prediction 569 666 - -
Dod04g0727 790 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 170 264 IPR036612 GO:0003723
Dod04g0727 790 MobiDBLite consensus disorder prediction 569 592 - -
Dod04g0727 790 MobiDBLite consensus disorder prediction 448 487 - -
Dod04g0727 790 MobiDBLite consensus disorder prediction 267 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0727 Dod-Chr4 11984690 11991962 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0727 K13095 - gmx:102668428 1023.46