Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0699 ATGGCGTTGCTGGTCGACAAAACCACAAGCGGTCGGGAGTACAAGGTGAAGGACATGTCCCAGGCTGACTTCGGCCGCCTGGAGATCGAGCTCGCCGAGGTCGAGATGCCGGGCCTCATGGCCTGCCGGGCCGAGTTCGGCCCAGCCCAGCCCTTCAAGGGCGCCAAGATCACAGGCTCCCTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCACCGCCCTCGGCGCCGAGGTCCGCTGGTGCTCCTGCAACATCTTCTCCACCCAGGACCACGCCGCTGCCGCCATCGCCCGCGACTCCGCCGCCGTCTTCGCCTGGAAGGGCGAGACCCTCCAGGAGTACTGGTGGTGCACTGAAAGGTCTCTTGACTGGGGACCCTCCGGAGGCCCTGACCTCATCGTGGATGATGGTGGTGACGCTACACTGCTCATCCACGAAGGGGTCAAAGCTGAGGAAGAATTCGAGAAGACGGGCCAGTTGCCTGACCCGTCTTCTACGGACAATGCGGAGTTCCAGATCGTGCTGACGATTATTAGGGACGGGTTAAAGACTGATCCCAAGAGGTACCGCAAGATGAAGGAGAGGCTCGTTGGTGTGTCGGAGGAGACCACCACTGGTGTCAAGAGGCTGTACCAGATGCAGGCCAATGGTACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCCGTCACCAAGAGCAAGTTTGATAACCTCTATGGCTGCCGTCACTCTCTCCCTGATGGTCTAATGAGAGCCACTGACGTCATGATCGCTGGCAAGGTCGCTGTCGTCTTCGGTTACGGAGACGTCGGCAAGGGCTGTGCCGCTGCCTTGAAGCAGGCCGGAGCACGTGTCATTGTAACCGAGATTGACCCCATCTGTGCTCTTCAGGCCCTCATGGAAGGTCTCCAAGTCCTGACCCTGGAGGATGTTCTCTCCGAGGCTGACATCTTTGTTACCACCACAGGTAACAAGGACATCATCATGGTTGATCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGGTCACTTTGACAATGAGATCGACATGCTTGGACTTGAGACATACCCTGGTGTGAAGCGCGTCACAATCAAGCCCCAAACTGATAGGTGGGTTTTCCCTGAGACCAACACAGGGATCATTGTCTTGGCTGAGGGTCGTTTGATGAACTTGGGTTGTGCTACGGGGCACCCAAGTTTTGTCATGTCCTGCTCCTTCACCAACCAGAGAAGAGCTAGTGGCAAGTATGAGAAGAAGGTTTATGTTTTGCCCAAGCACCTTGATGAGAAGGTGGCTGCTCTCCACCTTGGCAAGCTTGGAGCCAAGCTCACCAAGCTTAGCAAAGACCAGGCTGATTACATCAGTGTCCCTGTGGACGGGTCCATACAAGCCTGCTCACTACAGGTTCTTTATTTCATTGGGTTTTTGAAGCGTAAGAGCAACAGAAATCTATTTTTTGGTCTGTGGAATGAGACCAAATGGGTTTGA 1509 0.5494 MALLVDKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRAEFGPAQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERSLDWGPSGGPDLIVDDGGDATLLIHEGVKAEEEFEKTGQLPDPSSTDNAEFQIVLTIIRDGLKTDPKRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVFGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSEADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRVTIKPQTDRWVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQRRASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVDGSIQACSLQVLYFIGFLKRKSNRNLFFGLWNETKWV* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0699 502 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 240 403 IPR036291 -
Dod04g0699 502 Hamap S-inosyl-L-homocysteine hydrolase [ahcY]. 9 468 IPR000043 -
Dod04g0699 502 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 262 279 IPR020082 -
Dod04g0699 502 SMART AdoHcyase_2 13 475 IPR000043 -
Dod04g0699 502 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 1. 85 99 IPR020082 -
Dod04g0699 502 Gene3D - 15 468 IPR042172 -
Dod04g0699 502 CDD SAHH 23 464 IPR000043 -
Dod04g0699 502 PANTHER ADENOSYLHOMOCYSTEINASE 1 471 - -
Dod04g0699 502 PIRSF SAHH 2 474 IPR000043 -
Dod04g0699 502 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 13 242 - -
Dod04g0699 502 Pfam S-adenosyl-L-homocysteine hydrolase 13 468 IPR000043 -
Dod04g0699 502 Gene3D - 243 404 - -
Dod04g0699 502 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 240 403 IPR015878 -
Dod04g0699 502 SMART AdoHcyase_NAD_2 240 403 IPR015878 -
Dod04g0699 502 PANTHER ADENOSYLHOMOCYSTEINASE 1 471 IPR000043 -
Dod04g0699 502 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 379 469 - -
Dod04g0699 502 TIGRFAM ahcY: adenosylhomocysteinase 14 467 IPR000043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0699 Dod-Chr4 10750232 10752813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0699 K01251 - cpap:110807929 885.174