Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0682 ATGGCGCGAATCCCTTTCGGCAGCTCCAGCAACAGCTATGCTTTTGCTTCCACCTTCTCTTATTCAACCCACGCGCTCCCTCTCTTCTACGCTCGCTACGGCTTCAACAGGATCAGTGTTTCTCCACGTTGTCGTTTTCGTGTCTATTGCCAATCTGAGTCCAAGACAAAGGAATTGCAGATAAGAAAGTGCTCCCCTTTTCTAGAAAGTTCATTGCTTTCTGGGAATGGTGCAGTGGCCTCGGATGAGTGGAAAGCAGTTCCTGACATTTGGAGATCTTCGGCTGAGAAGTATGGGGATAAAGTTGCCTTAGTAGATCCGTATCATGATCCTCCTTCAACTATGACTTATAAACAGTTGGAGGAAGCAATATTGGACTTTGGTGAAGGCTTGAGAGTTATTGGAGTAAGACCAGATGAGAAGATTGCACTTTTTGCTGATAATTCATGTCGCTGGCTTGTAGCAGATCAAGGCATGATGGCAAGTGGAGCAATCAATGTGGTAAGGGGCTCAAGGTCATCTAATGAGGAGCTGTTTCAAATATACAGCCACTCTGAAAGTGTTGCACTGGCTGTGGACACACCTGAAATGTTTAATCGGATTGCAAAATCATTTTATGGAAAGGCTCCCATGCGATTTGTTATTCTGCTTTGGGGAGAAAAGTCATCCCTGCTTACTGAAGGAAACAAGGAGGTGCCAGTCTTTACTTTCATGGAAGTCATAGATAGGGGACGAGAGAGTCGCAGGGCATTGGTTGATTCTCATGATACTAAGCAGCACTATCTGTATGAAGCAATTAAGTCTGATGACATTGCTACTCTTATATATACAAGTGGAACTACTGGAAATCCAAAAGGTGTTATGCTTACCCATCGGAATCTTCTACATCAGATAAAAAACTTATGGGATATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGCATGCTGCCTTCTTGGCATGCATACGAAAGAGCTTGTGAGTATTTCATTTTCTCATATGGTGTTGAACAAGTATACACAACTGTGAGAAACTTGAAGGATGATTTGGCACATTACCGACCACATTACATGATTTCTGTTCCTCTAGTTTATGAAACATTATATAGTGGGATCCAGAAGCAGTTATCTACAGGCTCCCTAGTCAGAAAGCTTGTTGCTTTCACATTCTTAAGGGTCAGCTTTGCATACATGGAATTTAAGCGGATTTATGAGGGTAAATGTCTAACAAAGCATCAGAAGCAGCCTTCCTATCTCTATTCAATGTTGGAATGGTTATGGGCAAGAGTCATTGCTGCAATATTATTTCCAGTTCATATGCTGGCAAAGAAACTGGTCTACAGTAAAATCCATTCAGCGATTGGAATATCAAAGGCTGGAATAAGTGGAGGTGGTAGCTTGGCTAGTCATGTTGACAAATTTTTTGAGGCTATTGGTGTGAAAGTGCAGAATGGATATGGTTTAACAGAAACTTCACCAGTTGTTGCTGCTCGACGACCTAGATATAATGTTATTGGATCTGTTGGGCATCCAATAAGGCATGTAGAATTCAAAGTTGTAGATTCTGAAACTGGGGAAGTTCTTCCACCTGGTTCAAAGGGAATTTTGAAAGTCAGGGGCCCACAAGTGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCTGGCTATAGATGGGGATGGCTGGCTAAATACTGGTGATTTAGGTTGGATTGTTCCCAACCATTCAACTGGGCGGAATCGTCATTCTGGTGGTGCGATTGTCGTGGAAGGCCGTGCTAAAGACACTATTGTGCTTTCAACAGGTGAAAATGTAGAACCAGGAGAACTTGAGGAAGCTGCCTTGAGAAGTACCCTCATTCAACAAATTGTTGTTATTGGCCAGGATAAGCGACGTCTTGGAGCTGTAATTGTTCCTGACAAAGAAGAAGTCTTAAAAGCAGCGAGGGAATTGTCAATTATAGATGCCAACAGTTCAGATGTCAGTCAGGAAAAAGTGACCAGCTTAATATATAGAGAATTAAAGACCTTGACTTCCGAGTTTCCATTTCAAATTGGGCCAATCCTTCTCGTAAATGATCCCTTCACGATTGATAATGGGCTTATGACACCCACCATGAAAGTTCGAAGGGATAGGGTTGCGGCTCAGTACAGTGACCAAATAGAGAACCTATACAAGTAA 2184 0.4235 MARIPFGSSSNSYAFASTFSYSTHALPLFYARYGFNRISVSPRCRFRVYCQSESKTKELQIRKCSPFLESSLLSGNGAVASDEWKAVPDIWRSSAEKYGDKVALVDPYHDPPSTMTYKQLEEAILDFGEGLRVIGVRPDEKIALFADNSCRWLVADQGMMASGAINVVRGSRSSNEELFQIYSHSESVALAVDTPEMFNRIAKSFYGKAPMRFVILLWGEKSSLLTEGNKEVPVFTFMEVIDRGRESRRALVDSHDTKQHYLYEAIKSDDIATLIYTSGTTGNPKGVMLTHRNLLHQIKNLWDIVPAEVGDRFLSMLPSWHAYERACEYFIFSYGVEQVYTTVRNLKDDLAHYRPHYMISVPLVYETLYSGIQKQLSTGSLVRKLVAFTFLRVSFAYMEFKRIYEGKCLTKHQKQPSYLYSMLEWLWARVIAAILFPVHMLAKKLVYSKIHSAIGISKAGISGGGSLASHVDKFFEAIGVKVQNGYGLTETSPVVAARRPRYNVIGSVGHPIRHVEFKVVDSETGEVLPPGSKGILKVRGPQVMKGYYKNPSATNLAIDGDGWLNTGDLGWIVPNHSTGRNRHSGGAIVVEGRAKDTIVLSTGENVEPGELEEAALRSTLIQQIVVIGQDKRRLGAVIVPDKEEVLKAARELSIIDANSSDVSQEKVTSLIYRELKTLTSEFPFQIGPILLVNDPFTIDNGLMTPTMKVRRDRVAAQYSDQIENLYK* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0682 727 Pfam AMP-binding enzyme 93 600 IPR000873 -
Dod04g0682 727 Gene3D - 82 396 IPR042099 -
Dod04g0682 727 CDD LC_FACS_like 110 714 - -
Dod04g0682 727 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 1 727 - -
Dod04g0682 727 SUPERFAMILY Acetyl-CoA synthetase-like 83 726 - -
Dod04g0682 727 Gene3D - 595 724 IPR045851 -
Dod04g0682 727 Gene3D - 458 501 - -
Dod04g0682 727 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 1 727 - -
Dod04g0682 727 ProSitePatterns Putative AMP-binding domain signature. 274 285 IPR020845 -
Dod04g0682 727 Gene3D Luciferase; Domain 3 502 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0682 Dod-Chr4 10277681 10317703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0682 1 727 Acyl Lipid Metabolism Gene Families AT3G23790 66.438 0.0 1001
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0682 K01897 - gmx:100782583 1179.08