Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0681 ATGTTTCATTGGACTTGTTTGTGGAGGGAAAGGAGCTTCCAAAAGGGGAAACATGGTCAGTTCACAAGTTTGGTGGGACCTGCGTGGGTAACCTCAGCGAGAATTAAGAATGTAGCGAATATAGTGGTCGGTGATGATTCGGAGAGGAAGGTGGTGGTGGTGTCGGCGATGTCAAAGGTGACTGACATGATGTATGATCTGATCCACAAGGCTCAATCTCGCGATGAGTCCTATGTGTCTGCACTGGATGCTGTTCTAGAGAAGCACACCTCAACTGCACGTGACCTGCTTCAGGGGGATGATCTCATTAGTTTCTTGTCGCAGTTGCGCCAAGACATCAGTAACCTTAAGGCAATGCTTCAAGCCATATACATAGCTGGTCATGCAACAGAATCCTTTACTGACTTTGTTGTGGGACATGGGGAGTTATGGTCTGCACAGATTTTGTGTTCTGTTATTAGGAAGAATGGGACTGACTGCAAATGGATGGATACAAGGGAAGTCCTTATTGTAAATCCTACTCGTTCTACCAATCAAGTTGATCCTGACTACTTGGAATCTGAGCGAAGACTTGAGAAATGGTACTCCCTGAATCCATCTAAGGTAGTTGTTGCTACAGGATTTATTGCAAGCACACCTGAAAATATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTCTCGGCAGCAATTATGGGTGCTCTATTTAGGGCTCATCAGGTGACAATTTGGACAGATGTTGATGGTGTGTATAGTGCAGACCCTAGAAAAGTTAGTGAGGCTGTGATTCTCAAGACATTATCTTATCAAGAGGCCTGGGAAATGTCTTATTTTGGTGCAAATGTCTTACATCCCCGCACAATAATCCCGGTTATGCGATATGGCATACCCATCGTAATAAGGAATATTTTCAACCTCTCCGCTTCTGGAACTAAGATCTGCCATCCTTCTATTATTGATGATGACGATAAGCAGAGCTTAAAAAATTATGTCAAGGGCTTTGCAACAATAGACAACTTGGCGCTTGTAAATGTTGAGGGAACTGGAATGGCTGGTGTTCCAGGTACAGCCAGTACTATTTTTGGTGCAGTAAAAGATGTTGCAGCTAATGTTATTATGATATCTCAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCCGTGCCTGAGGAGGAAGTAAAAGCTGTTGCTGAGGCATTGGAGTCTAGATTTCGTCATGCTTTGGATGCTGGGCGTCTTTCTCAGGTTGCAGTCATTCCAAATTGTAGTATTTTGGCAGCTGTTGGCCAGAAAATGGCAAGTACCCCAGGAGTTTGTGCCACCCTTTTCAATGCATTGGCCAAGGCCAATATAAATGTGCGGGCTATAGCACAAGGTTGTTCTGAGTACAATATTACTGCCGTTGTTAAGCGAGAAGATTGTATAAAGGCTCTACGGGCTGTCCATTCTAGATTTTATCTCTCAAGAACCACCATAGCAATGGGCATTATTGGACCTGGACTAATTGGTAGCACGCTACTTGACCAGTTAAGGGATCAGGCTGCAATTCTGAAAGAAGAATTTAACATTGATTTGCGTGTAATGGGCATCATGGGTTCAAAGTTAATGCTTCTTGATGATGCGGGCATCGACTTAGCTAAGTGGAGAGAACTTCTAGAGGAAAAAGGGGTAGTGGCTAATTTGGAAAATTTTGTTCAATATGTGCATGGAAATCATTTTATACCAAACACTGTATTAGTGGACTGCACAGCTGACTCCAGCATTGCAAGCCATTATTATGATTGGCTGCGGAAAGGAATACATGTAATTACCCCCAATAAGAAGGCAAATTCAGGACCACTTAATCAGTATTTGAGGTTAAGAGCTCTTCAGAGGCAATCATATACACATTACTTCTATGAAGCAACCGTTGGAGCTGGTCTTCCAATTATCAGCACTCTACGGGGCCTTCTTGAAACTGGTGATAGAATATTGCAAATTGAAGGCATCTTCAGTGGGACTTTGAGTTATATCTTTAATAACTTCAAAGATGGCCGTGCTTTTAGTGAGGTAGTCGCTGAAGCAAAGGAAGCAGGCTACACTGAGCCAGATCCAAGGGATGATCTGTCTGGAACTGATGTTGCTAGAAAGGTGATAATTCTTGCAAGGGAATCTGGTTTAAAGCTAGAGCTTTCTGATATTTCTGTTGAAAGCCTTGTGCCAGAATCACTAAGAGCTAGTGCATCAGCTCATGAGTTTATGCAACAGTTGCCAAATTTTGACCAGGAGTTAACAAAGAAACAACAAGATGCTGAGAATGCAGGGGAAGTGAGTACTAAGTAA 2319 0.4295 MFHWTCLWRERSFQKGKHGQFTSLVGPAWVTSARIKNVANIVVGDDSERKVVVVSAMSKVTDMMYDLIHKAQSRDESYVSALDAVLEKHTSTARDLLQGDDLISFLSQLRQDISNLKAMLQAIYIAGHATESFTDFVVGHGELWSAQILCSVIRKNGTDCKWMDTREVLIVNPTRSTNQVDPDYLESERRLEKWYSLNPSKVVVATGFIASTPENIPTTLKRDGSDFSAAIMGALFRAHQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMRYGIPIVIRNIFNLSASGTKICHPSIIDDDDKQSLKNYVKGFATIDNLALVNVEGTGMAGVPGTASTIFGAVKDVAANVIMISQASSEHSVCFAVPEEEVKAVAEALESRFRHALDAGRLSQVAVIPNCSILAAVGQKMASTPGVCATLFNALAKANINVRAIAQGCSEYNITAVVKREDCIKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLLDQLRDQAAILKEEFNIDLRVMGIMGSKLMLLDDAGIDLAKWRELLEEKGVVANLENFVQYVHGNHFIPNTVLVDCTADSSIASHYYDWLRKGIHVITPNKKANSGPLNQYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRAFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDISVESLVPESLRASASAHEFMQQLPNFDQELTKKQQDAENAGEVSTK* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0681 772 Gene3D - 32 313 IPR036393 -
Dod04g0681 772 SUPERFAMILY Carbamate kinase-like 31 315 IPR036393 -
Dod04g0681 772 Gene3D - 489 653 - -
Dod04g0681 772 Pfam ACT domain 349 403 IPR002912 -
Dod04g0681 772 ProSiteProfiles ACT domain profile. 345 414 IPR002912 -
Dod04g0681 772 CDD AAK_AK-HSDH 31 314 IPR041743 -
Dod04g0681 772 SUPERFAMILY ACT-like 329 404 IPR045865 -
Dod04g0681 772 TIGRFAM asp_kinases: aspartate kinase 32 484 IPR001341 GO:0004072|GO:0008652
Dod04g0681 772 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 641 769 - -
Dod04g0681 772 Pfam Amino acid kinase family 33 302 IPR001048 -
Dod04g0681 772 ProSiteProfiles ACT domain profile. 426 503 IPR002912 -
Dod04g0681 772 PANTHER - 10 769 IPR011147 GO:0004072|GO:0004412|GO:0009067
Dod04g0681 772 Pfam ACT domain 419 482 IPR027795 -
Dod04g0681 772 Pfam Homoserine dehydrogenase, NAD binding domain 497 633 IPR005106 GO:0016491|GO:0050661
Dod04g0681 772 CDD ACT_AKi-HSDH-ThrA_2 421 486 - -
Dod04g0681 772 MobiDBLite consensus disorder prediction 750 772 - -
Dod04g0681 772 Gene3D Aspartokinase, catalytic domain 58 157 IPR042199 -
Dod04g0681 772 Pfam Homoserine dehydrogenase 641 753 IPR001342 GO:0006520
Dod04g0681 772 ProSitePatterns Homoserine dehydrogenase signature. 687 709 IPR019811 GO:0006520
Dod04g0681 772 CDD ACT_AKi-HSDH-ThrA-like_1 340 419 - -
Dod04g0681 772 PANTHER ASPARTOKINASE-HOMOSERINE DEHYDROGENASE 10 769 - -
Dod04g0681 772 PIRSF ThrA 25 771 IPR011147 GO:0004072|GO:0004412|GO:0009067
Dod04g0681 772 SUPERFAMILY ACT-like 411 500 IPR045865 -
Dod04g0681 772 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 489 663 IPR036291 -
Dod04g0681 772 Gene3D Dihydrodipicolinate Reductase; domain 2 654 772 - -
Dod04g0681 772 Gene3D - 327 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0681 Dod-Chr4 10233230 10249140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0681 K12524 - gmx:100812202 1294.64