Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0679 ATGGTTCACCACCGTTTCCTCCTCATATCTTACCCCGCACAAGGGCACATAAACCCCGCACTCCAATTCGCCAAGAGGCTCATCGCCATGGGCGTGCACGTCACCTACGTCACCACCGTCTTCATGCACCGCCGGATGAAAGCCCAGAAACCCATCAGCGGCCTCTCCATCGCCGCGTTCTCCGACGGCTTCGACGACGGTTTCGCCGCCGCTGGCAACGCCGACATCTTGTTCTACGTCTCGGAGCTCAGGCGCCACGGCTCAGAGTACCTGAGAGGGCTCATATCCTCGGGAGCGCAAATGGGGCAACCATTCACTTGCTTGGCCCACACGCTCCTCCTCCCTTGGGCCTCCGCCGTGGCACGTGAGTTTCACCTTCCGTCGGTGGTGCTGTGGATTCAGGCCGCCACTGTCTTCGACATGTACTATTACTACTTCCACGACCACACGGACTACATAACAGAGAAAACAAAAGACCCCTCATGTTCAATAGAATTACCGGGTTTGCCACTGGTTTTCAAAGCCCGTGACTTTCCCTCTTTCTTCTTGGCCTCTAACTTGTACTCCTTCGCTCTTCCTTCCTTCAAGGAGCAGTTAGATGAGCTTGAGCTTGAACCCAACCCAAGGATTCTGGTGAACACTTTTGAGGATTTGGAACCTGAGGCCTTGAGAGCCGTTGATAAGATCAGATTGGTACCGGTCGGACCGTTGATCCCTTCTGCTTTTTTGGATGGTAAAGACCCTGAAGACACTTGCTTCGGCGGTGACATATTCCATGGGAAAAACAATGATTACGTAAAGTGGTTGGACTCAAAGCCTGAGTGTTCCGTGGTTTATGTCTCGTTCGGAAGCCTCGCTGAGCTGTCAAGGAGGCAAATGGAGGAAGTTGCAAGTGCTTTGATGGATTCTGGACGTCCTTTCTTGTGGGTCATTAGAGAGAAAGCGAACGAAGAAGGAAACGAAGAATTGGAGTGCAGAGAGGAACTGGGAAAGGTGGGGAAGATAGTTAGCTGGTGTTCACAGGTGGAGGTGCTCTCGCACCCTTCATTGGGATGCTTTGTGACGCATTGTGGGTGGAATTCGACACTGGAAAGCCTGGCTTCCGGGGTGCCCGTGGTGGCGTTTCCTCAGTGGACAGACCAAGGGACGAATGCTAAGATGATAGAAGATGTGTGGAAGAATGGTGTGAGGATTGATGAGCGTGAGGTGAGTGAAGATGGGGTGGTGAGAGGGGAAGAAATTAGGAGGTGTTTGGAGGTGGTGATGGGGGGCGGAGAGAAAGGACAAGAGTTGAGAAGGAACGCGAACAAGTGGAAGGGTTCGGCAAGGGAAGCCGTGAAGGAAGGAGGGTCTTCGGATAAGAATCTGGGGACATTTCTCGATGATGTTGGGCGTTCCTGTGGCTGGAATTTGAGCAATTCAGTTTGA 1428 0.5273 MVHHRFLLISYPAQGHINPALQFAKRLIAMGVHVTYVTTVFMHRRMKAQKPISGLSIAAFSDGFDDGFAAAGNADILFYVSELRRHGSEYLRGLISSGAQMGQPFTCLAHTLLLPWASAVAREFHLPSVVLWIQAATVFDMYYYYFHDHTDYITEKTKDPSCSIELPGLPLVFKARDFPSFFLASNLYSFALPSFKEQLDELELEPNPRILVNTFEDLEPEALRAVDKIRLVPVGPLIPSAFLDGKDPEDTCFGGDIFHGKNNDYVKWLDSKPECSVVYVSFGSLAELSRRQMEEVASALMDSGRPFLWVIREKANEEGNEELECREELGKVGKIVSWCSQVEVLSHPSLGCFVTHCGWNSTLESLASGVPVVAFPQWTDQGTNAKMIEDVWKNGVRIDEREVSEDGVVRGEEIRRCLEVVMGGGEKGQELRRNANKWKGSAREAVKEGGSSDKNLGTFLDDVGRSCGWNLSNSV* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0679 475 CDD GT1_Gtf-like 5 445 IPR002213 GO:0008194
Dod04g0679 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 267 409 IPR002213 GO:0008194
Dod04g0679 475 Gene3D Glycogen Phosphorylase B; 252 444 - -
Dod04g0679 475 Gene3D Glycogen Phosphorylase B; 9 456 - -
Dod04g0679 475 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 3 464 - -
Dod04g0679 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 464 - -
Dod04g0679 475 PANTHER GLYCOSYLTRANSFERASE 3 464 - -
Dod04g0679 475 ProSitePatterns UDP-glycosyltransferases signature. 338 381 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0679 Dod-Chr4 10167046 10168473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0679 6 462 Glycosyltransferase AT4G15550 48.745 8.16e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0679 - - pvu:PHAVU_001G265400g 623.624