Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0671 ATGTCGGAGATGGCGAACCCAGATCCCGAGGGCGTCGACGGGGTCCGAATGACGTGGAACGTGTGGCCACGCACCAAAGTGGAGGCCAGCAAGTGCGTGATCCCACTCGCCGCCACGCTCTCCCTCATCCGCCCCCACCCCGACATCCCCCGCCTCCCATACTCCCCTCTCCGCTGCAAGACCTGTTCCTCCGCCCTCAACCCCTTCGCCCGCGTCGACTTCACCGCCAAGATCTGGATCTGCCCCTTCTGCTACCAGCGCAACCGCTTCCCCCCTCACTACTCCGCTATCTCCGACACCAACCTCCCCGGTGAGCTCTACCCTCAATACACCACCATCGAGTACACCACCACCACCAACACGTCATTTGACCCTTCCTTCCCCACGCGCTCCCACGCGCCGCCTCTCCCGGTCTTCGTCTTCGTCCTCGACACCTGCATGATCGCCGAGGAGCTCGAATTCGCGAGGTCGGCTCTCCGGCAGGCGGTGGGGCTGCTCCCCGACAACGCACTCGTGGGGTTCGTGTCGTTCGGGACGCAGGTGCAGGTGCACGAATTGGGGTTTTCGGAAATGTCCAAGGTTTATGTGTTCCGTGGAACGAAGGAGATTTCGAAAGACCAGATTTTGCAGCAGCTGGGACTTGGGAGGGTGCTGCAGAAGGGATTGCATCATGCCGGCAGCGGCGGAGGCAGTTACCCTGCGCCCTCGGCCGGCGTCACGCGGTTCTTGCTGCCTGCGTCGGATTGTGAATACACTCTCAATTCGCTACTAGATGAATTGCAGACCGACCAATGGCCTGTTCCCCCAGGCAGCCGTCCTGCTCGGTGCACTGGTGTGGCTTTGGGTGTTGCGGCTGGCTTGCTTGGTGCTTGTGTTCCTGGGACTGGGGCAAGAATCATTGCTTTGGTAGGAGGTCCATGCACTGAAGGACCTGGCACGATTGTATCAAAAGATCTATCTGACCCAGTGCGTTCTCATAAAGATCTTGATAAAGATGCAGCACCATACTTTAGAAAGGCAGTCAAATTTTATGAGGGTCTCGCTAAACAGCTGGTTAGCCAAGGTCACGTTTTAGATCTTTTTGCATCCGCACTTGATCAGGTTGGAGTTGCAGAAATGAAAGTTGCGGTTGAAAGAACTGGTGGCCTTGTTGTCCTGGCTGAAAGTTTTGGTCATTCGGTCTTCAGGGACTCTTTTAAGCGTGTTTTTGAGGATGGGGAACAATCTCTTGGTCTTTGTTTCAATGGAACCCTTGACATAAATTGCTCAAAGGAAATCAAAATTCAGGGAATAATTGGACCTTGCACATCGTTGGACAAGAAAGGGCCTTCTGTTGCTGATACTGTTGTAGGAGAGGGGAACACAACAGCATGGAAGATGTGTGGCCTTGACAAGAGTACGTGCTTGACTGTGATGTTTGATCTTTCATCAAGTGATCGTTCAAACACAATGGCTGCTGTCAACCCACAGTTGTACCTGCAGTTCCTTACGAGTTACCAGAGCCCAGATGGTCAATTAGTGCTTCGCGTCACAACAGTAACTAGAAGATGGGTAGATAGTTCTGTTAGCTCTGAGGAATTGATTCAAGGATTTGACCAAGAAACTGCTGCAGTGTTAATGGCTAGATATGCATCTTTGAAAATGGAGAGTGAGGAAGCATTTGACGCCACTCGGTGGTTGGATCGGTTCCTCATTCGCTTCTGTTCTAAGTTTGGTGACTATCGCAAGGATGATCCATCATCTTTTACATTAAACCCTTCGTTTTCACTGTTCCCCCAGTTTATGTTCAATCTGCGGCGGTCACAGTTTGTACAGGTTTTTAACAACAGTCCGGATGAGACTGCCTACTTCCGGATGTTGTTAAACAGGGAAAATATTAGTAATGCTGCTGTCATGATTCAGCCATCTTTAATATCGTATTCATTTAATTCACTGCCTGCACCAGCATTATTAGATGTGGCATCCATTGCGGCAGACCGGATTCTGTTGCTAGATTCATATTTTAGTGTGGTAATTTTTCACGGGATGACAATAGCTCAGTGGCGCAACTTGGGTTACCACAACCAACCAGAACACCAGGCATTTGCGCAACTATTACAAGCTCCACACGATGATGCCCAAATGATAATTAGAGAACGGTTCCCTGTTCCTAGATTGGTGGTGTGTGATCAACATGGTTCCCAGGCTAGATTTCTATTGGCAAAGCTGAATCCCTCGGCAACATATAGTAATGCACACGAGATGGCTTCTGGTTCAGATGTTATCTTCACTGACGATGTTAGCCTTCAAGTTTTCTTTGAACATCTCCAAAGGCTGGCTGTCCAATCTTGA 2331 0.5062 MSEMANPDPEGVDGVRMTWNVWPRTKVEASKCVIPLAATLSLIRPHPDIPRLPYSPLRCKTCSSALNPFARVDFTAKIWICPFCYQRNRFPPHYSAISDTNLPGELYPQYTTIEYTTTTNTSFDPSFPTRSHAPPLPVFVFVLDTCMIAEELEFARSALRQAVGLLPDNALVGFVSFGTQVQVHELGFSEMSKVYVFRGTKEISKDQILQQLGLGRVLQKGLHHAGSGGGSYPAPSAGVTRFLLPASDCEYTLNSLLDELQTDQWPVPPGSRPARCTGVALGVAAGLLGACVPGTGARIIALVGGPCTEGPGTIVSKDLSDPVRSHKDLDKDAAPYFRKAVKFYEGLAKQLVSQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLAESFGHSVFRDSFKRVFEDGEQSLGLCFNGTLDINCSKEIKIQGIIGPCTSLDKKGPSVADTVVGEGNTTAWKMCGLDKSTCLTVMFDLSSSDRSNTMAAVNPQLYLQFLTSYQSPDGQLVLRVTTVTRRWVDSSVSSEELIQGFDQETAAVLMARYASLKMESEEAFDATRWLDRFLIRFCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAAVMIQPSLISYSFNSLPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYHNQPEHQAFAQLLQAPHDDAQMIIRERFPVPRLVVCDQHGSQARFLLAKLNPSATYSNAHEMASGSDVIFTDDVSLQVFFEHLQRLAVQS* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0671 776 SUPERFAMILY beta-sandwich domain of Sec23/24 8 531 - -
Dod04g0671 776 Pfam Gelsolin repeat 644 732 IPR007123 -
Dod04g0671 776 Pfam Sec23/Sec24 beta-sandwich domain 414 518 IPR012990 -
Dod04g0671 776 Pfam Sec23/Sec24 trunk domain 135 403 IPR006896 GO:0006886|GO:0006888|GO:0030127
Dod04g0671 776 Gene3D - 10 515 - -
Dod04g0671 776 Gene3D - 53 112 - -
Dod04g0671 776 Pfam Sec23/Sec24 zinc finger 56 94 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Dod04g0671 776 CDD Sec23_C 624 744 IPR037550 GO:0030127|GO:0090114
Dod04g0671 776 SUPERFAMILY vWA-like 137 404 IPR036465 -
Dod04g0671 776 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 2 775 IPR037364 -
Dod04g0671 776 SUPERFAMILY Helical domain of Sec23/24 532 634 IPR036175 GO:0006886|GO:0006888|GO:0030127
Dod04g0671 776 Gene3D Severin 634 738 IPR029006 -
Dod04g0671 776 Pfam Sec23/Sec24 helical domain 532 628 IPR006900 GO:0006886|GO:0006888|GO:0030127
Dod04g0671 776 Gene3D von Willebrand factor, type A domain 134 412 IPR036465 -
Dod04g0671 776 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 635 775 IPR036180 -
Dod04g0671 776 Gene3D Sec23/Sec24 helical domain 529 773 - -
Dod04g0671 776 SUPERFAMILY Zn-finger domain of Sec23/24 47 119 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Dod04g0671 776 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 2 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0671 Dod-Chr4 10075878 10084479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0671 K14006 - gmx:100813940 1347.8