Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0631 ATGTCTCAGGTGGATAACAGAAATTCTTCAGCTGCCAAGCGTGCTAGGACTGATGGTAGTCGTAGGGAAGATGATTGGACATGCCCCAGCTGTGGTAATGTCAATTTCTCTTTCAGGACAACTTGCAACATGCGTAATTGCACTCAGCCGAGGCCTGCAGATCATAATTCGAAATCTGCTGCCAAGCCTCTACAGGCTCCACAGGGTTATTCATCCTCAGCTCCTTATTTAGGTTCTAATGCTCCTTCTTCAATATATCTTGGCGTCCCGCCATATGGGTCTTCTCTGTTCAATGGATCATCTATTCCTCCATATGATGTTTCATTTTCTGGAGGATCAGCTTATCACTACAATTATGGAAGTCGCCTTTCTGCTGGCAGTCCTTATAGACCACTGCATTTATCTGCACCAACACCCTACTCAAGTGGATCCATGATTGGAAATGGTGGGATCTATGGTATGCCCCCGCTGTTGGATCGGTATGGCCTGGGTATGCCTATTGGACCAGGAACAATGGGTCCTAGGCCAGGATTTTTTCCTGATGACAAGTCTCAGAAAAAGGGTGCAGGTTTGTTATATTTAGCTTATTTATATTTTGGCTCAAATGTAAGTTTCTTGATATTGTTTTATTTGTCCTACTCCCTATTTCTCCATCTAGATGCAACTCGTGACAATGACTGGACATGTCCAAAATGTGGCAACGTCAACTTCTCGTTCAGACCTGTCTGCAACATGAGAAAGTGCAATACACCCAAGCCTGGATCCCAGGCTTCAAAGTCAGACAAAAATTCTAAGCAAAAGATGCCGGAGGGTAGCTGGAAGTGTGAAAAATGTAATAACATAAACTATCCATTCAGAACCAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCGGGTGAATCAGAGAAATCTTCTTCACCAGCTCCAGATCAAAACGATCAGGAATTGGCTGATTGCGTCTTTTATGCCATGTGCCTGCCTTGCCTCTATTACGGGTGGATGCTGATTCGTTGTCTGCTGTTCAGTTTGCTACGAAGGGATGCTTTCCCCGCTTACCCTGTTTGA 1068 0.4476 MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPLQAPQGYSSSAPYLGSNAPSSIYLGVPPYGSSLFNGSSIPPYDVSFSGGSAYHYNYGSRLSAGSPYRPLHLSAPTPYSSGSMIGNGGIYGMPPLLDRYGLGMPIGPGTMGPRPGFFPDDKSQKKGAGLLYLAYLYFGSNVSFLILFYLSYSLFLHLDATRDNDWTCPKCGNVNFSFRPVCNMRKCNTPKPGSQASKSDKNSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPGESEKSSSPAPDQNDQELADCVFYAMCLPCLYYGWMLIRCLLFSLLRRDAFPAYPV* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0631 355 SUPERFAMILY Ran binding protein zinc finger-like 17 54 IPR036443 -
Dod04g0631 355 MobiDBLite consensus disorder prediction 1 25 - -
Dod04g0631 355 PANTHER ZINC FINGER PROTEIN 139 315 - -
Dod04g0631 355 SMART zf_4 24 50 IPR001876 -
Dod04g0631 355 SMART zf_4 271 297 IPR001876 -
Dod04g0631 355 SMART zf_4 225 251 IPR001876 -
Dod04g0631 355 SUPERFAMILY Ran binding protein zinc finger-like 263 300 IPR036443 -
Dod04g0631 355 PANTHER OS08G0521400 PROTEIN 5 147 - -
Dod04g0631 355 PANTHER OS08G0521400 PROTEIN 139 315 - -
Dod04g0631 355 MobiDBLite consensus disorder prediction 11 25 - -
Dod04g0631 355 PANTHER ZINC FINGER PROTEIN 5 147 - -
Dod04g0631 355 Gene3D - 221 255 - -
Dod04g0631 355 Gene3D - 258 301 - -
Dod04g0631 355 Gene3D - 14 54 - -
Dod04g0631 355 MobiDBLite consensus disorder prediction 50 69 - -
Dod04g0631 355 MobiDBLite consensus disorder prediction 250 272 - -
Dod04g0631 355 Pfam Zn-finger in Ran binding protein and others 224 253 IPR001876 -
Dod04g0631 355 Pfam Zn-finger in Ran binding protein and others 269 300 IPR001876 -
Dod04g0631 355 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Dod04g0631 355 SUPERFAMILY Ran binding protein zinc finger-like 222 255 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0631 Dod-Chr4 9238555 9245400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0631 - - gmx:100798624 552.747