Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0625 ATGAAGAGTAACAGGAATCCTCTGCCAGAGAGACGGTGGTTCTTGGGCTTGGCCATAGTGGGCCTGATCGGAGCCGCACTCTTCATAGCCACATTGATTCTAACCTCCGACACGTCATTCATGTGCCCGGCGTTGCCACTCCTCGGCGGGATGGCCCAGGCCCAAGCCCGAGTCCACAAGGACTACAGCCCAACGACGATCCAGCTCCGGGCCATACTCCACTACGCAACATCCCGCGTGGTCCCACAACAATCGCTCGCGGAGATCAAGGTCAGCTTCGACGTCCTCAAATCCCTGGGCCGGCCCTCCAACTTCCTGGTCTTCGGGCTCGGCCACGACTCCCTCATGTGGGCCTCGCTAAACCCGGGAGGCACCACGCTGTTCCTCGAGGAAGACCCAAAGTGGGTCCAGACCGTCCTCAAGGACGCGCCGGGCCTCCGGGCTCACACGGTCCGTTACAGGACACAGCTCCGCGACGCGGACAGGTTGCTATCTTCGTACCGGTCCGAGCCCGCCTGCAGCCCGTCAAGGGCCCGCTTACGTGGCAACGAGGCCTGCCAGCTGGCGCTGCACAACCTGCCCGACGAGGTGTATGAGACGGAGTGGGACCTCGTCATGATCGACGCGCCGCGAGGGTACTTCGCGCAGGCGCCGGGGAGGATGGCCGCCGTGTTCTCCGCCGCGGTGATGGCGAGGGAGAGGAAGGGATCCGGTGTGACGCACGTGTTCCTGCACGATGTGGATCGGAAGGTGGAGAGGGTTTACGCGGAGGAGTTTCTCTGTCGGAAGTACTTGGTGAAAAGCGTTGGCAGGCTTTGGCATTTTGAGATCCCACCTTCTAACCAAACAGACAGTGATCGTTTCTGCTAG 870 0.6172 MKSNRNPLPERRWFLGLAIVGLIGAALFIATLILTSDTSFMCPALPLLGGMAQAQARVHKDYSPTTIQLRAILHYATSRVVPQQSLAEIKVSFDVLKSLGRPSNFLVFGLGHDSLMWASLNPGGTTLFLEEDPKWVQTVLKDAPGLRAHTVRYRTQLRDADRLLSSYRSEPACSPSRARLRGNEACQLALHNLPDEVYETEWDLVMIDAPRGYFAQAPGRMAAVFSAAVMARERKGSGVTHVFLHDVDRKVERVYAEEFLCRKYLVKSVGRLWHFEIPPSNQTDSDRFC* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0625 289 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 70 289 IPR006514 GO:0045492
Dod04g0625 289 PANTHER OS11G0490100 PROTEIN 4 289 IPR006514 GO:0045492
Dod04g0625 289 Gene3D Vaccinia Virus protein VP39 78 287 IPR029063 -
Dod04g0625 289 Pfam Polysaccharide biosynthesis 87 275 IPR021148 -
Dod04g0625 289 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 4 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0625 Dod-Chr4 9146014 9147220 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0625 - - gmx:100791951 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0625 04 9146014 9147220 Dod04g0625 04 9146014 9147220 ECH
Dod04g0625 04 9146014 9147220 Dod04g2032 04 43798458 43799357 PCT