Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0622 ATGTACGGATCCAAGAGCAACAGAGAAGATTCGGAGCGAACCGCTTTCAGAAGAGCGGAGAAGAAGTACAAGCTCTTCTACGATGACAATGCTTCCAAGAACAAAAAGAAGAAACAACCAAAACCCGTGGACTTAACGGATGTCCTTGACTTCGGTTCGATTCTAGAATGCCACAATCGAAACGGCGAGCTTCCTCCGTTTGTTACCGTCCTTCACGACAAGTTCTCCTCCCCAGTGTTCTCCTTGCAAAATTGCCCAGGCTTTTATTTTATTCCTGGCGCCTTAAGCATACAGAAACAATGTGGTTTGATAAGGGAGAGTTTGACTGATTTCCCGCAGCCACCTAACAGAACAAATCATAATGCTATGTACGGTCCAATTAGTGATTTATTCGATGCTGCTAAAGAAGGGAAAGTTTTGGTTGAAGAGAAGTCTCCAGTTACTTCATCTGAACTACGTCCTGATTGTGGTTGTCGTGATGGTAACAGGTGGAAGTTTGTTACGGAAAAGGAAGCGTCCTTAAGGAAGTGTAAATCGGTTTTTGCTTCTGCTTTAATGCGGAAGTTGCGATGGAGCACCCTTGGCCTACAATTTGATTGGTCCAGGACCTGCATGTGTAGCGAATCCATTTTGGGAGTTAAAGTTTCAACTTCTACATGCCACATCTTGTGTTCGTGGACATCACTCAAAGATTGTGTTTTTGTGCAGCGGAACTATGATGTATCTCTACCTCATAACAAAATCCCTGAAGCTCTCTGTGAGCTAGCTAAAGAATTGTCGAAACCTGCATTGCCTACAGGTGCTGAATTCCAGCCTGAAGCTGCGATAGTGAATTACTTTGACTTAGGTGACACACTGGGTGGCCACCTTGATGATATGGAAGCAGATTGGAGCAAGCCTATAGTTAGTTTAAGTTTGGGCTGCAAAGCTATATTTCTTTTGGGAGGAAAATCTAGAGAGGATCCTCCCCTGGCAATGTTCCTTAGAAGTGGTGATGCTGTACTCATGGCTGGAGAAGCAAGGGAATGCTTTCATGGTGTTCCTCGGATATTCACAGACGAAGAAAATGCTGAAATAGGCCATCTTGAGACACAACTGACACATGAAGATGATCTTTGTTTCTTAAAATATATTCAAACTTCAAGAATCAACATCAATATCAGACAAGTTTTTTGA 1176 0.4303 MYGSKSNREDSERTAFRRAEKKYKLFYDDNASKNKKKKQPKPVDLTDVLDFGSILECHNRNGELPPFVTVLHDKFSSPVFSLQNCPGFYFIPGALSIQKQCGLIRESLTDFPQPPNRTNHNAMYGPISDLFDAAKEGKVLVEEKSPVTSSELRPDCGCRDGNRWKFVTEKEASLRKCKSVFASALMRKLRWSTLGLQFDWSRTCMCSESILGVKVSTSTCHILCSWTSLKDCVFVQRNYDVSLPHNKIPEALCELAKELSKPALPTGAEFQPEAAIVNYFDLGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGVPRIFTDEENAEIGHLETQLTHEDDLCFLKYIQTSRININIRQVF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0622 391 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 271 391 IPR005123 -
Dod04g0622 391 Pfam 2OG-Fe(II) oxygenase superfamily 234 388 IPR027450 -
Dod04g0622 391 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 1 391 IPR004574 -
Dod04g0622 391 PANTHER ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB 1 391 - -
Dod04g0622 391 Gene3D - 162 390 IPR037151 -
Dod04g0622 391 SUPERFAMILY Clavaminate synthase-like 86 390 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0622 K10765 - gmx:100797068 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0622 04 9094234 9099574 Dod04g0622 04 9094234 9099574 ECH