Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0617 ATGAACGTGTTAGCATGTGTCGCCAGTAGAGACCCTTTATACGAGATTAGTGCGGGTTATATCGTGCGGACGAGGAACCTGCTCCGAATTGCGATATTTAATATCAGTTATATCAGAGGCCTGTTTCCTGAGAAGTACTTCAATGATAAGTCTGTTCCTGCTTTAGAGATGAAAATCAAGAAGCTTATGCCAGTGGATGCTGAGTCTCGAAGACTGATTGATTGGATGGAAAAAGGTGTATACGATGCTCTGCAGAAGAAATACCTGAAGACGCTTCTGTTCTGCGTGTGTGAGGCAGTTGACGGACCGATGATTGAGGAATATGCATTTTCCTTTAGCTATTCCGATTCTGAAAAGCAAGAGGTTTCCATGAATATCAACCGCACTGGAAACAGGAACGGTGGGACCTTCAAGTGTAACTCTACGACAGAAATCACTCCCCAACAGATGAGGAGTTCTGCATGTAAAATGATTCGAACCCTAGTCCAGTTGATGAGAACTCTGGAGAAGATGCCAGAAGAGCGTACCATTCTGATGAAGCTACTCTACTACGATGATGTGACGCCCGCTGATTATGAGCCTCCATTCTTCAGAGGCTGCACAGAAGAAGAAGCTTATAATCCATGGGTGAAGAATCCACTGAAAATGGAGGTAGGGAATGTAAACAGCAAGCATTTCGTATTAGCTCTGAAGGTGAAGAGTGTGCTCGACCCTTGTGAGGATGATAATGAGGGGATCCAAGATGATAGGAGCATTGGTGATGATTCCATGCAAAAGAATGAGTATTATGATACTGACAGTGAGGTTGATTATTCTCAGGGGGATCGATATGTAGTTGCTCCAATAGAGAGGCAGCAAGCACAGGAAGATAATGACATGATTGATGAAGACAATACCCAGGACCCTATGGAAGATGAGCATCAACTGGCACGGGTCAAGGAGTGGATCAACTGTTGCCACCTTGACACTATTGACCTTACCGACGTTCTATCAAATTTTCCGGACATCTCAATGGTTCTCATTGAAGAGATCACGGATAAGCTTGTTAAGGATGGCGTGCTATCAAAAACAGGAGATGACACCTACGTCATTAACAAGGACAAGAAATCTGAATATGAGTTCACCATTGTGAAAGAAGAAATTGATGGTCAAATTCCTCAAGTTTATGACAAAGCTTCGCAGGAAGAAGATCGCATATACATGAAAGCTCTCTATCATGCACTTCCGATGACATACGTCTCAGCGACGAAGATTCAAAGCTTTCTTAATGGTGAAGTAAACCAGACAGCAGCACGGAAAATTATTGATAAAATGACTCGTGAGGGTTTTGTCGAACCCAAAGGCAACAAAAGATTAGGGAAACGTGTGATACATTCTGAGTTGACTGAGAGGAAATTCATTGAAGTCCAAAAAGCTCTAAGTACTGCTGAAGCTATGGATGTTGATCATTGTGAACCAAACAGCAAGTCCAAACCAGCTTGTTTCCGTATCAGTGGAAGCAACTATGACGTGTCTACCTGTGGTGTCCTCCACTCCATTGGATCAGATTTAACTAGAATGAAAGTGACATCTGATACAAATTGTACTGGCTCCCCGAGGAGTGGACACAACATCTCAAAGGCAAAAGAGCCCGGGAGCACCCCAAAAAGCAGGCCAGTTGCTTCAAGAGAGAGTTTTGCGGCAGGCAAAGAGAACAGCAGAGCAAATGGAAATAGAATTGCAAATCAAAATGACGAAGCTGATACAATTATCTGCAGTAAGTCCTCCCAAGACAAGCGACCCAGGAAATCAAGCGCGGTCAAGGAGCCTATCCATCAAAATGTGAAGCGTCATAGATCTCAGGCCCTGTGA 1851 0.4371 MNVLACVASRDPLYEISAGYIVRTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPVDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSDSEKQEVSMNINRTGNRNGGTFKCNSTTEITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCTEEEAYNPWVKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGIQDDRSIGDDSMQKNEYYDTDSEVDYSQGDRYVVAPIERQQAQEDNDMIDEDNTQDPMEDEHQLARVKEWINCCHLDTIDLTDVLSNFPDISMVLIEEITDKLVKDGVLSKTGDDTYVINKDKKSEYEFTIVKEEIDGQIPQVYDKASQEEDRIYMKALYHALPMTYVSATKIQSFLNGEVNQTAARKIIDKMTREGFVEPKGNKRLGKRVIHSELTERKFIEVQKALSTAEAMDVDHCEPNSKSKPACFRISGSNYDVSTCGVLHSIGSDLTRMKVTSDTNCTGSPRSGHNISKAKEPGSTPKSRPVASRESFAAGKENSRANGNRIANQNDEADTIICSKSSQDKRPRKSSAVKEPIHQNVKRHRSQAL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0617 616 SUPERFAMILY The spindle assembly checkpoint protein mad2 22 239 IPR036570 -
Dod04g0617 616 MobiDBLite consensus disorder prediction 523 616 - -
Dod04g0617 616 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 25 603 - -
Dod04g0617 616 Pfam HORMA domain 25 225 IPR003511 -
Dod04g0617 616 MobiDBLite consensus disorder prediction 585 609 - -
Dod04g0617 616 MobiDBLite consensus disorder prediction 523 544 - -
Dod04g0617 616 MobiDBLite consensus disorder prediction 562 584 - -
Dod04g0617 616 Gene3D HORMA domain 21 276 IPR036570 -
Dod04g0617 616 ProSiteProfiles HORMA domain profile. 18 232 IPR003511 -
Dod04g0617 616 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 25 603 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0617 K12778 - gmx:100792473 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0617 04 8917352 8923620 Dod04g0617 04 8917352 8923620 ECH