Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0605 ATGCCTGGTTTTGTTGCTGGAAAGAAGAGATATACAGACCGAAACATGTGTTTCACCAATTTGGCCAATCAAGATACATTAACTCATTCACAAAGCAATCATTGTTTATCCATTGAGGCACTGGAACTGGATAATGGCGATAGCCCCATTCTACCTGGGCTTCCTGATGATGTGGCAAAGCATTGCCTTGCACTTGTGCCTCGTTCCAACTTCCCATCCATGGGTGGTGTCTGTAAGAGATGGAGGTCATTTATTCAAAGCAAAGAGTTTATCACTGTGCGAAGATTGGCTGGGATGGTTGAGGAATGGCTCTATTTCTTAACAACGGACAGTGAAGGAGAGGGAAGTCACTGGGAGGTTATGGATTGTATCGGTCATAAATGCCGATCTCTCCCATCAATTCCTGGTCCAGAAAAGGCTGGGTTTGGTGTGGTGGTTCTTAATGGAAAGCTTCTTGTTATGGCTGGCTATTCAGTTACAGATGGACCTACTTTTGCCTCAGCAGAGGTTTACCAATATGATTCTTTGCTCAACAGTGTAACAATCAAGGCATGA 555 0.4414 MPGFVAGKKRYTDRNMCFTNLANQDTLTHSQSNHCLSIEALELDNGDSPILPGLPDDVAKHCLALVPRSNFPSMGGVCKRWRSFIQSKEFITVRRLAGMVEEWLYFLTTDSEGEGSHWEVMDCIGHKCRSLPSIPGPEKAGFGVVVLNGKLLVMAGYSVTDGPTFASAEVYQYDSLLNSVTIKA* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0605 184 Gene3D - 86 184 IPR015915 GO:0005515
Dod04g0605 184 SMART fbox_2 54 94 IPR001810 GO:0005515
Dod04g0605 184 PANTHER KELCH REPEAT F-BOX PROTEIN 1 181 - -
Dod04g0605 184 PANTHER OS02G0202900 PROTEIN 1 181 IPR045887 -
Dod04g0605 184 SUPERFAMILY Kelch motif 101 181 IPR015915 GO:0005515
Dod04g0605 184 SUPERFAMILY F-box domain 46 95 IPR036047 GO:0005515
Dod04g0605 184 Pfam F-box domain 53 90 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0605 Dod-Chr4 8724788 8726120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0605 43 121 Miscellaneous Gene Families AT4G33900 36.471 2.09e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0605 - - gmx:100802912 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0605 04 8724788 8726120 Dod04g0605 04 8724788 8726120 ECH