Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0600 ATGGTGTTGGTGAATTCTGGAGCTGGTCTTAGGAAACAGGTTTTTCCGATTGAATATGAAACGGAGGTGTCGCAGAGGCTCGTGGATGCTGCTCATTACGGCGACACGGAAGCTGCGTTTGAGTGCGTGGAGTCTCCTTACGTGGACGTGAACTTTGTCGGGGCGGTGTCGTTGAAGGGCAAAGCGACGGAGATCGTGCTGAACGACGAGTCGTCTCATGGAGTCCACTTGTCGTACGAGGAGTTCAAGACGGAGGTCACTGCTCTGTTCCTCGCCGCGCATAATGGCAACTTGACACTCCTCAGGAAGCTCCTGAATGCGGGAGCTAATGTAAATACGAGATTGTTCCGTGGGTATGCCACAACAGCAGCAGTGAGGGAGGGGCATCTGAAAGTGTTGGAGGTCCTTATCAATGGTGGGGCGTCACAACTTGCTTGCGAGGAGGCTTTGATGGAAGCAAGCTACTTGGGCCGGGCCAGGTTTGCTGAGCTACTCATGCAGTCCCACATGATCCGTCCTCAAGTTGCAGTTCATGCCCTTGTCTCTGCATCTTGCAGAGGCTTCATTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATATCAATGCAATTGATAGAACGTTGCTACAGTCTTCAAAGCCATTTCTCCACGCTAATGTTGATTGCAGTGCATTGTTCGCCGCTGTTGTCAGCAGACAGATCGACGTTGTCCGCTTACTATTGCAGGTTGGTGTAAAGCTAGACATGAAGGTCAAACTGGGGGCTTGGTCATGGGAAACAGACACAGGGGAAGAATTTCGCGTAGGTGTTGGACTAGCTGAGGCATATCCTATCATCTGGTGCGCTGTGGAGTATTTTGAATCCAGTGGTGCCATATTACAGATGCTGCTTAGTCACCTCTCACCTAATAGTTTTCACACTGGGAGGACTCTCTTGCACCATGCAATCCTTTGTAACAACGAAAAAGCTGTAAATATACTTCTAAATTGTGGTGCAGATGCAGAATTGGCGGTGCCAACCACCAATGAAACAAATGTGCACCCTATTCACATGGCTGCACGGCTTGGATCAAGTAACATTCTTCAGTGCCTGATTAATAGTGGTTGTAACTTGGACTCGCAAACAAAATCTGATGACACGGCAATAATGATTTGCACAAGGTATAAGCATGAGAAGTGCCTTAGAGTGCTAGCATCAGCAGGTGCCGATTTGGGTATGGTGAATTCATCTGGTCACTGGGCTGTTTCAATTGCAAATTCTGTTCAGTGGACTAGTATATTCCAAAAGGTGATCCTTGATGTGATTAGAGCTGGAAAGGTTGTTAAATCAAGCAATGCATCTAGATTTTCTGCTTTGATGTTTGTGACCCGTGCAAATGACATGGAGGGTCTAAAGAAACTCATTGAAAACAGGAACATAGATATAGATGAGCAAAATGAGAATGGATTCTCAGCTGCAATGGTAGCTGCAGCTTCAGGTAATGTAGAGGTTTTCAGGTTGCTTCTTTATGCTGGTGCTGATGTGCTTAATCTCAAAAACAAGTATGGTTTGACAGCACTTAACCTCATTGATGTGAGCCAAAATGGGGAAGAGTTCCAAAGGGTGATGCTTGAATATGCACTTAGAAAGGGGTGCATTGGATCCAACGAGGTGAACCCTTTACACAGGGCAGCTCGTTATGGTGACATAGACATTGTTCACAAGTTGTTAAAAGAAGGGTATGATGTGAATGCTTTCGATTCAAATGGATACACCCCATTGATGTTAGCAGCTAGAGGGTGCCGTGGTGACATGTGTGAGCTTTTGATCTCATGTGGTGCAAAATGTGATGTTAAGAATGAGAGACATGAGACAGCACTTTCACTAGCAAGAGAAAATGGCAAGGGAAATGATGCAGAGCGTGTTATATTAGATGAGCTAGCTACAAGAGTGGTCTTGTGTGGGGCACGTGTGAAGAAGCACACAAAGTGTGGTAAAGGGTCACCTCATAGTAAGCAACTTGGAATGGTTGGGCTTGCTGGGATTTTAAGATGGGGAAAATCAAATAAGAGGAATGTGGTTTGCAAAGAGGCTGAGGTTGGGCCTAGTGAAAAATTCAGGTGGAACCGAAGGAGAAAGTTTGATGTTGATGAGCCTGGAATGTTCCATGTCGTCACTACAAAAAATAAGGAGGTGCATTTTGTATGTGAAGGTGGGGTTGAAATGGCTGAGTTGTGGGTTAGGGGGATTAGATTAGTCACAGGAGAAGCCATTTGTGGCAAATGA 2268 0.4594 MVLVNSGAGLRKQVFPIEYETEVSQRLVDAAHYGDTEAAFECVESPYVDVNFVGAVSLKGKATEIVLNDESSHGVHLSYEEFKTEVTALFLAAHNGNLTLLRKLLNAGANVNTRLFRGYATTAAVREGHLKVLEVLINGGASQLACEEALMEASYLGRARFAELLMQSHMIRPQVAVHALVSASCRGFIEVVDVLIKHGVDINAIDRTLLQSSKPFLHANVDCSALFAAVVSRQIDVVRLLLQVGVKLDMKVKLGAWSWETDTGEEFRVGVGLAEAYPIIWCAVEYFESSGAILQMLLSHLSPNSFHTGRTLLHHAILCNNEKAVNILLNCGADAELAVPTTNETNVHPIHMAARLGSSNILQCLINSGCNLDSQTKSDDTAIMICTRYKHEKCLRVLASAGADLGMVNSSGHWAVSIANSVQWTSIFQKVILDVIRAGKVVKSSNASRFSALMFVTRANDMEGLKKLIENRNIDIDEQNENGFSAAMVAAASGNVEVFRLLLYAGADVLNLKNKYGLTALNLIDVSQNGEEFQRVMLEYALRKGCIGSNEVNPLHRAARYGDIDIVHKLLKEGYDVNAFDSNGYTPLMLAARGCRGDMCELLISCGAKCDVKNERHETALSLARENGKGNDAERVILDELATRVVLCGARVKKHTKCGKGSPHSKQLGMVGLAGILRWGKSNKRNVVCKEAEVGPSEKFRWNRRRKFDVDEPGMFHVVTTKNKEVHFVCEGGVEMAELWVRGIRLVTGEAICGK* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0600 755 ProSiteProfiles Ankyrin repeat profile. 179 207 IPR002110 GO:0005515
Dod04g0600 755 PANTHER ANKYRIN DOMAIN PROTEIN 8 754 - -
Dod04g0600 755 SUPERFAMILY Ankyrin repeat 27 253 IPR036770 -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat region circular profile. 550 581 - -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat profile. 583 615 IPR002110 GO:0005515
Dod04g0600 755 Gene3D - 11 174 IPR036770 -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat profile. 84 116 IPR002110 GO:0005515
Dod04g0600 755 Gene3D - 275 431 IPR036770 -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat profile. 550 582 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 482 511 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 116 145 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 448 478 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 308 337 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 550 579 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 84 113 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 378 407 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 175 204 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 583 612 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 221 250 IPR002110 GO:0005515
Dod04g0600 755 SMART ANK_2a 345 374 IPR002110 GO:0005515
Dod04g0600 755 Pfam Ankyrin repeats (3 copies) 537 614 IPR002110 GO:0005515
Dod04g0600 755 Pfam Ankyrin repeats (3 copies) 347 407 IPR002110 GO:0005515
Dod04g0600 755 Pfam Ankyrin repeat 309 335 IPR002110 GO:0005515
Dod04g0600 755 ProSiteProfiles Ankyrin repeat region circular profile. 84 114 - -
Dod04g0600 755 Pfam Ankyrin repeats (many copies) 459 503 IPR002110 GO:0005515
Dod04g0600 755 Gene3D - 175 261 IPR036770 -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat region circular profile. 482 509 - -
Dod04g0600 755 SUPERFAMILY Ankyrin repeat 307 634 IPR036770 -
Dod04g0600 755 Coils Coil 462 482 - -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat region circular profile. 308 334 - -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat profile. 482 514 IPR002110 GO:0005515
Dod04g0600 755 PANTHER ANKYRIN REPEAT-CONTAINING 8 754 - -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat profile. 345 377 IPR002110 GO:0005515
Dod04g0600 755 Gene3D - 535 641 IPR036770 -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat profile. 308 340 IPR002110 GO:0005515
Dod04g0600 755 Gene3D - 432 532 IPR036770 -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat region circular profile. 345 373 - -
Dod04g0600 755 ProSiteProfiles Ankyrin repeat region circular profile. 583 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0600 Dod-Chr4 8644206 8650298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0600 481 640 Miscellaneous Gene Families AT5G02620 30.675 1.40e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0600 - - gmx:100795638 1266.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0600 04 8644206 8650298 Dod04g0600 04 8644206 8650298 ECH