Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0594 ATGTTGGCAGCTCTGCGAGCTCGAGCGTCGGTTTCATCGCCGTGGCGTTCTTCACTGCCGTGGAAGCTTAGGTTTTCTACTTCTTCTACTTCCGTCGTTGACGGCGTCAGAAAATGCCCCCTGGATCTGCAGGAGATTGAGAAGGTTCTGACGGACGTTAAGGCCGACGACGTTAAGGTGATGCCTGCCCCCAACCACTGCGATTGGGCCGATTTCATGGTCCTCGCCACCGGCAGGTCCACGTGGCACGTCAAGAACATAGCTCAAGCCCTAATTTACAAGGCTAAGCAGAAGCAGAAAGGTGCAGAACGAATGATGCTACCCAGTGTGGAAGGGCAAGCAGGAGGAAAGTGGATCGTAATTGACTCTGGTAAGGTGATAGTCCATGCGCTTGATGAAAAAGCTAGAGCTTACTACAATTTGGAAGGTCTTTGGACTGGCTCAGAGACATTACAAAAGGAACGAATTGAGGTGCTGGTTAACTATGCGAGGTCATCCAAGGAAGCAGAGGAGGTTTCCAAGGAGATTGAGGCATCTGGTGGACAAGCTCTTACTTTTGGGGGAGATGTTTCTAACGAGGCTGACGTGGAGTCTATGATTAAAACTGCAACTGATGCTTGGGGAACTGTTGATGTACTGATAAACAATGCAGGAATAACTAGAGATGGTTTGTTAATGAGAATGAAGAAATCTCAATGGCAGGAAGTTATTGATCTAAATCTCACTGGTGTTTTCCTTTGCACACAGGCTGCTGCTAAGATTATGATGAAGAAGAAGAAGAGCTCCGTCCGAGGTAGCTGTGGCCTGTGGGGGCATTTTCTTGTGAACGCTGCACACATGGAAGGTCAGGTTGCCGAGCTGCGAACGAAAATGGATCGCATGATGCATTTGCTGCAGAGGAAGGACAACTGA 912 0.4879 MLAALRARASVSSPWRSSLPWKLRFSTSSTSVVDGVRKCPLDLQEIEKVLTDVKADDVKVMPAPNHCDWADFMVLATGRSTWHVKNIAQALIYKAKQKQKGAERMMLPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTGSETLQKERIEVLVNYARSSKEAEEVSKEIEASGGQALTFGGDVSNEADVESMIKTATDAWGTVDVLINNAGITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKSSVRGSCGLWGHFLVNAAHMEGQVAELRTKMDRMMHLLQRKDN* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0594 303 PRINTS 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 231 251 IPR003560 GO:0008667|GO:0019290
Dod04g0594 303 PRINTS 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 228 IPR003560 GO:0008667|GO:0019290
Dod04g0594 303 Hamap Ribosomal silencing factor RsfS [rsfS]. 36 146 IPR004394 -
Dod04g0594 303 Gene3D Beta Polymerase, domain 2 41 145 IPR043519 -
Dod04g0594 303 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 4-LIKE 151 264 - -
Dod04g0594 303 Pfam short chain dehydrogenase 149 262 IPR002347 -
Dod04g0594 303 PANTHER SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER 151 264 - -
Dod04g0594 303 Gene3D - 146 289 - -
Dod04g0594 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 277 IPR036291 -
Dod04g0594 303 Pfam Ribosomal silencing factor during starvation 45 145 - -
Dod04g0594 303 SUPERFAMILY Nucleotidyltransferase 44 152 IPR043519 -
Dod04g0594 303 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 44 145 IPR004394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0594 Dod-Chr4 8503655 8512484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0594 151 284 Acyl Lipid Metabolism Gene Families AT1G24360 65.000 1.62e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0594 - - gmx:100500659 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0594 04 8503655 8512484 Dod04g0594 04 8503655 8512484 ECH