Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0590 ATGTCAGAAGGCCACCTACCTTGGATAAATTGGAATTGGATTCGGTCAAGGCTAGCATCAGACAAGAAGATTAAGATCGGAATCAACGGATTTGGAAGGATTGGCCGTTTGGTTGCCAGGGTTGCTCTCCAAAGGGATGATGTTGAGCTCGTTGCAGTCAACGACCCTTTCATCACCACTGATTACATGACATACATGTTCAAGTATGATACCGTTCATGGCCAGTGGAAGCATTTTGATGTCAAGGTGAAGGACTCAAAGACCCTTCTCTTTGGTGACAAGCCAGTCACTGTTTTTGGAATCAGGAACCCTGAGGAGATCCCATGGGGTGAAGCTGGTGCTGATTTCGTTGTTGAGTCAACTGGTGTATTCACTGACAAGGAAAAGGCTGCTGCACACTTGAAGGTTATCAATGACCGATTTGGAATTGTTGAGGGTCTTATGACCACAGTTCACGCCATCACAGCTACTCAGAAGACCGTTGATGGTCCATCAAACAAGGATTGGAGGGGTGGAAGAGCTGCTTCCTTCAACATAATTCCCAGCAGCACAGGAGCTGCTAAGGCTGTAGGAAAAGTTCTTCCATCACTGAATGGCAAATTGACCGGAATGTCCTTCCGAGTCCCCACTGTGGATGTCTCAGTTGTTGATCTCACTGTCAGGCTAGAGAAGAAGGCAACCTATGAGGACGTCAAAGCTGCCATCAAGGAGGAATCAGAGGGAAAATTGAAGGGCATCTTGGGTTACACTGAAGAAGATGTGGTGTCCACTGACTTTGTTGGTGATAGCAGGTCTAGCATATTTGATGCTAAGGCAGGAATTGCTTTGAATGACAACTTCTTGAAACTTGTGTCGTGGTATGACAATGAATGGGGTTACAGCTCCCGTGTGATTGATTTGATTGTCCACATTGCATCTGCGGTTTGA 927 0.4628 MSEGHLPWINWNWIRSRLASDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHFDVKVKDSKTLLFGDKPVTVFGIRNPEEIPWGEAGADFVVESTGVFTDKEKAAAHLKVINDRFGIVEGLMTTVHAITATQKTVDGPSNKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRLEKKATYEDVKAAIKEESEGKLKGILGYTEEDVVSTDFVGDSRSSIFDAKAGIALNDNFLKLVSWYDNEWGYSSRVIDLIVHIASAV* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0590 308 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 133 287 IPR020829 GO:0016620
Dod04g0590 308 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 146 162 IPR020831 GO:0016620
Dod04g0590 308 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 243 258 IPR020831 GO:0016620
Dod04g0590 308 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 203 220 IPR020831 GO:0016620
Dod04g0590 308 Gene3D Dihydrodipicolinate Reductase; domain 2 127 289 - -
Dod04g0590 308 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 135 307 IPR020831 GO:0016620
Dod04g0590 308 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 135 307 - -
Dod04g0590 308 Gene3D - 16 83 - -
Dod04g0590 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 135 IPR036291 -
Dod04g0590 308 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 131 287 - -
Dod04g0590 308 PIRSF GAPDH 133 308 IPR020831 GO:0016620
Dod04g0590 308 PIRSF GAPDH 22 136 IPR020831 GO:0016620
Dod04g0590 308 SMART gp_dh_n_7 24 138 IPR020828 GO:0051287
Dod04g0590 308 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 24 127 IPR020828 GO:0051287
Dod04g0590 308 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 14 135 - -
Dod04g0590 308 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 14 135 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0590 Dod-Chr4 8432319 8437834 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0590 K00134 - gmx:100782924 530.791