Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0572 ATGGCGGAAATCGAAGGAAAGCGCGAGAGAATGGGCAAACAGAAGAAAGGTGCCAGAGGAGTGATCGCCCTCACCGGAGCTGCTGCGGTGGTCGCAATCGCCACCAACCTCGCCGTCACCGCCATCAAGTACCACAAGGAAAAAAAGAAAGCAAAGAAGAAAGATCTTGCGGGTTCGAAGGTGCGCGTTAACCTATCTGCATCTGAGATTCTCAAGTTGGCAGACCAAATCATTGCCAAGTCAAACAAGGTCCACGATTCTGTTGCATCGGTTCCACTTGATAAGGTTACTTATTCAAATGTTATATCACCTCTGGCAGAACTGCAAGCACAGCAATTTCCATTGATTCAGTCTTGCGTGTTTCCGAAGATGGTATCAACTCGTGAGGATGTGCGGAAAGCAAGTTCAGAGGCAGAGCGAAGAATAGATGCTCATATCGACATGTGCAGCAAACGTGAAGATGTATATATTGTTGTTAAAGCATTTGCAGCAAAGGGGGAGTGGATGAATGCAGAAGCCAAATGCTTTGTTCAAATTCTGGTGAGAGACTTTGAGAGAAATGGATTGAACCTCACTGTTAGCAAAAGAGAGGAGCTACTGCGTCTAAAGGCTCACATTGATGAGTTAAGCTTTAGATATATCCAAAATCTCAATGATGACACCACATTTCTCCTTTTCAGTGAGGCAGAGTTAGCTGGATTACCTGAAGAGTTTCTCAAGGGTTTAGATAAATCTGAAGATGGAAAGTTGAAGATATACCTGAGAAGTCATCATGTTGGAGCTGTGCTTGAATTTTGCAAGGTAGGAAATACAAGGCGGATGGTATCAGGGGCATATGGGAATAGATGTGGAGAGGTCAATCTTTCTATTCTAGAAAGTCTGGTGCAACAACGCCATAAATATGCTCGTTTGCTAGGCTATTCGAACTATGCAGAATATGCCATTGATGTTAGAATGGCAAAGACACCTATGAAGGTGTTTGAGTTCCTGGAGGACTTATCAACCAGTTTAACTGACTTGGCCATGAAAGAACTTGATATGTTGAAAAATTTGAAGAAGAAAGAGGAAGGGGAGTTTCCATTTGGAATTGAGGACATACTGTATTATGTAAAACGGGTTGAAGAGCAGAGCTATGATCTGGACTTTGGCGAGCTCAAACAATACTTTCCAAGTAGTTTAGTTCTATCTGGAATCTTCAAAATTCTCCAAGATCTATTTGGTTTAAGGTTTGATGAAATTGCAGGAGTGGATGTTTGGCATTCTGATGTTCGTGTGTTTTCCGTACTTGACTTAGGTTCCAGTGAAATCTTAGGTTATTGCTACCTTGATTTGTTCTCAAGGGAAGGAAAATATGCTCATACTTGTGTGATGGCTCTCCAGAACAGTGCATTAAATCCCAGTGGCGAGCAGCAGGTACCGGTCGCATTACTAATAGCTCAGTGTCAAAAGGATGCCAACAGTAGTCCTGGATTACTGCGGTTTTCTGAAGTGGTCAGTCTGTTCCACGAGTTTGGCCATGTGGTTCAACAAATTTGCAACCGTGCATCGTTTACAAGATTCTCAGGATTACGCGTTGATCCTGACTTTGTGGAAATACCTGCTCATCTTCTAGAAAACTGGTGTTATGAAAGCTTTTCTCTGAAGTTGATTTCTGGATTTCATCAGGATATTACAAAGCCCATAAAGGATGACACATGCGAATCAATTAAAAATTGGAAGACTTCCTTTTCGGTACTTAAGTTGAAACAAGAGATTCTATACTGTCTTTTTGACCAAATCATACATTCTGCGGATAACATTGACATCCGGGAGTTATTCAAGCATCTTCATGCCAAGGTGATGTTAGGGTTGCCAGCATTGGAAGGAACCAATCCAGCTTCGTGTTTTCCTTCTACTGTTATTGGTTATGAGGCTGCTTGCTACAGCAGTGTATGGAGTAAGGTTTTTGCTGCTGATATATTCGCCTCAAAGTTCTGCAATGATGCTTTAAACCAGCATGTGGGCATGCAATTTAGGAAGAAGGTATTGGCCCCAGGAGGAGTGAAGGATTCTATTGAAGTTCTCTCGGACTTTCTGGGAAGAGAACCTTCAATTCGAGCTTACGTTGAGAACAAAGTCAAGTATAGTTTGTAA 2133 0.4219 MAEIEGKRERMGKQKKGARGVIALTGAAAVVAIATNLAVTAIKYHKEKKKAKKKDLAGSKVRVNLSASEILKLADQIIAKSNKVHDSVASVPLDKVTYSNVISPLAELQAQQFPLIQSCVFPKMVSTREDVRKASSEAERRIDAHIDMCSKREDVYIVVKAFAAKGEWMNAEAKCFVQILVRDFERNGLNLTVSKREELLRLKAHIDELSFRYIQNLNDDTTFLLFSEAELAGLPEEFLKGLDKSEDGKLKIYLRSHHVGAVLEFCKVGNTRRMVSGAYGNRCGEVNLSILESLVQQRHKYARLLGYSNYAEYAIDVRMAKTPMKVFEFLEDLSTSLTDLAMKELDMLKNLKKKEEGEFPFGIEDILYYVKRVEEQSYDLDFGELKQYFPSSLVLSGIFKILQDLFGLRFDEIAGVDVWHSDVRVFSVLDLGSSEILGYCYLDLFSREGKYAHTCVMALQNSALNPSGEQQVPVALLIAQCQKDANSSPGLLRFSEVVSLFHEFGHVVQQICNRASFTRFSGLRVDPDFVEIPAHLLENWCYESFSLKLISGFHQDITKPIKDDTCESIKNWKTSFSVLKLKQEILYCLFDQIIHSADNIDIRELFKHLHAKVMLGLPALEGTNPASCFPSTVIGYEAACYSSVWSKVFAADIFASKFCNDALNQHVGMQFRKKVLAPGGVKDSIEVLSDFLGREPSIRAYVENKVKYSL* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0572 710 Gene3D Neurolysin, domain 3 196 702 IPR024077 -
Dod04g0572 710 PANTHER SACCHAROLYSIN 49 707 - -
Dod04g0572 710 Gene3D Endopeptidase. Chain P; domain 1 39 186 IPR024080 -
Dod04g0572 710 CDD M3A_TOP 71 703 - -
Dod04g0572 710 Pfam Peptidase family M3 266 703 IPR001567 GO:0004222|GO:0006508
Dod04g0572 710 Gene3D Collagenase (Catalytic Domain) 390 540 IPR024079 GO:0008237
Dod04g0572 710 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 49 707 IPR045090 GO:0004222|GO:0006508
Dod04g0572 710 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 64 703 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0572 K01392 - gmx:100793518 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0572 04 8168235 8181467 Dod04g0572 04 8168235 8181467 ECH