Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0563 ATGGGTGAATCAACTTGTCTCTTGCGTTCCTTCTCCACTCCCGCTGAAACTTCCGGCGTAGCCCAAGAGGCTAACCCCATGCGTGTGCTTGGAGAATCTATATCTTTTGGGAGGTTTTTGTCAGAAAGCTTGGATTGGGAGAAATGGTCAGCATTCTCGCACAATCGCTATGTGGAGGAAGCTGAGAAATATTCGAAACCAGGTTCTGTTGCTGCGAAGAAAGCCTATTTCGAGGCTCACTACAAGAGAAAGGCTGCGGAGAAAGCCGCTGCCTTGGTCCAAGAAGCAAATGCTCAAGCCAGTGGGACTCTTGATTCAGAAACTCGGGAAGCAAATTGCACCGACTCGGCAGTTATGGCAGAGTCAGATGCCAATGGCATTGTGACTGCCAATGTACAATACCAAGTTGCTCATTGTGCTGATACTGATACAAACCAATATAAGTGTGATGTTGGACAAAGTGGTTTAGACACCTCCAATGTGGAGGGAGGAGTTGGACAACGTGATATGGACATTTCCAATTCAGAAGGAGCAGGGGACGCGCCACATACTTGCACCAATGGAAGTCTTAATGTCGAAAGTTATATCATTGTTGATAATAATTCTAACCAGTTTGATCATGTTGAAGCCCATAAGAATATCGGTGTCCCTGGAGAAGAGTGGATGCCTTATCCTGGCAATGTTGATCAGGAAGTTTTGCCTGTCAAGGGAACAGAAGTAAATTCTTCTCCGAAATTATCAACCAAAACTAGGGCTGCCAAGCTTCCTCATTCTCATAATGAAAGGAAGGGTGCTGCAGCTTTACTGCCCAGAAGTGGAATCAGTAAGAAGTCTGTTGGAGTCTCAGGTGAGAATCAGAGACTGACTGTACGGTCACTCCGCTTGTCAATCAATCTTCCCTCAGGCACCCGTGAAACAAGAATAGCTGCTGCAGCTGCACAATCCAAGAGTGGCATAAACAGTGTCTCAAAGAGTAAGAAGTCTCTTGAAGGTTCATTTGAGAAGAAGCAAATAAGTGCAAAGTCCCTCGACATGTTGGTCAATCTTCCATCTGCTGCTGGTGAAACAAGCAAAACAGCTACTGCAGCTGTTAAACCCAAAAATGCAATAAACCTTGAATCAAAATGTACGAAGTCTGTTGGAGGCTCTCTTAAGAAAAGACCAACTGCATGGTCGCTCCAAATGTCAATCAATCTCCCTACTGGTGCAGGTGAAACGAGTAAAATGGTTTCAGTGCTTGAAAAGAACCATTCTAATTTGCCCAATATTTCCAAATATGATCCACTGACATCACAGACATCAACTAAGGCATCTCATGGTTCCTTGAATCAAGCTTCAGAAAATCCCCTTTCCCAGGGAAGAAGAAGGAGTGGAAGGCTGCTTAATAAGTCTGTGTCTGGAGGAGTTACTGCAAATGCAAAAGTTTCGTCCATTTCTGCTGACTGCTTGAAATCTTCACGCACCACCAAAAGCACTCCTCGACCCCCTACTATATCATCACCGTTTAGATTCAGGAGTGAAGAAAGAGCAGTAAAACGTAAAGAGTTCCTTCAGAGGATTGATGAAATTAAAAACAAGGAATCTGAGAAAGTTCAGTTGCAAAGGACACCCAAGGATAAAATAGAGCATGATCACAAGAAACTGCGGCAGAGCAGTGTCTTTAAACCCAAACTAAATGAGGACAGGAATGGTGGGTCACACTCACCAAGTGATCATATGAGGAAGCTCCAGTCACCAAAGTTTGGCAGGAAGGTAAGTTCAGGCACTGCCCAGGACAAAAACTTTGGAAATTCACGGAAGCCTCCAATTAGGACCAATAAGTCCAAACGTATTACAGAAAAAGTTACTTCATTACCAAATATCACTCGAGAGAATGCTTCTCCAAATATTCAACATTGA 1899 0.4392 MGESTCLLRSFSTPAETSGVAQEANPMRVLGESISFGRFLSESLDWEKWSAFSHNRYVEEAEKYSKPGSVAAKKAYFEAHYKRKAAEKAAALVQEANAQASGTLDSETREANCTDSAVMAESDANGIVTANVQYQVAHCADTDTNQYKCDVGQSGLDTSNVEGGVGQRDMDISNSEGAGDAPHTCTNGSLNVESYIIVDNNSNQFDHVEAHKNIGVPGEEWMPYPGNVDQEVLPVKGTEVNSSPKLSTKTRAAKLPHSHNERKGAAALLPRSGISKKSVGVSGENQRLTVRSLRLSINLPSGTRETRIAAAAAQSKSGINSVSKSKKSLEGSFEKKQISAKSLDMLVNLPSAAGETSKTATAAVKPKNAINLESKCTKSVGGSLKKRPTAWSLQMSINLPTGAGETSKMVSVLEKNHSNLPNISKYDPLTSQTSTKASHGSLNQASENPLSQGRRRSGRLLNKSVSGGVTANAKVSSISADCLKSSRTTKSTPRPPTISSPFRFRSEERAVKRKEFLQRIDEIKNKESEKVQLQRTPKDKIEHDHKKLRQSSVFKPKLNEDRNGGSHSPSDHMRKLQSPKFGRKVSSGTAQDKNFGNSRKPPIRTNKSKRITEKVTSLPNITRENASPNIQH* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0563 632 MobiDBLite consensus disorder prediction 484 506 - -
Dod04g0563 632 Pfam Targeting protein for Xklp2 (TPX2) domain 502 570 IPR027329 -
Dod04g0563 632 MobiDBLite consensus disorder prediction 419 458 - -
Dod04g0563 632 MobiDBLite consensus disorder prediction 484 499 - -
Dod04g0563 632 MobiDBLite consensus disorder prediction 612 632 - -
Dod04g0563 632 MobiDBLite consensus disorder prediction 582 602 - -
Dod04g0563 632 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 371 632 IPR044216 -
Dod04g0563 632 MobiDBLite consensus disorder prediction 239 263 - -
Dod04g0563 632 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 371 632 - -
Dod04g0563 632 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 326 - -
Dod04g0563 632 MobiDBLite consensus disorder prediction 528 632 - -
Dod04g0563 632 MobiDBLite consensus disorder prediction 528 578 - -
Dod04g0563 632 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 326 IPR044216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0563 Dod-Chr4 8031884 8036276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0563 - - gmx:100799349 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0563 04 8031884 8036276 Dod04g0563 04 8031884 8036276 ECH