Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0555 ATGTCTGAGAATCACGTATCAGAGCAGGATTCGAGTTGGGGTTCTCAATTCGGGAACGACCATGCATCGAATGGGGTTACCGAATCTAGCACTGATTCGGTTGCAATTAACCAGGTGGAGCGTGGTGGTGCCAACGATGGGGTTTTGGGAGACACTGAAGATGGAACTGCAAGAGATGACATGTTTGTTGATTGCCCTGATGAGCTTAGCACATTGGATAGTAAGATGAGTGATGCCAGGATAGGAGCTGTAGCTGGGGATGATGAAGAAGAAGGTGAGGGGGAGGTGAATCAAGTTGTGCATCAACAAGCTCATGGGGGAGGAGGAGACAGTTACTCTGCTGGCAAGGTGGAGCAGCTGCGGCATAAGCTGGAGGAGGCTGTTGCTGAGAAAGAAAATATTGTACAGGGATACCAGGAAGAAAGAGAGATGGTTGCCCGAGGAGTGATTGATCTTCATTGTCAGCTGAAGGCTCTGAGTTCTCACCAGTCATTGCCGAATGAAGGTGAGATTGGAGTTAGGGAGGTCGCTGATTTTCAGTTGGAGGAGAAGATAAGAGAATGTTTGGAGTTTGTGAAAACTGCCTCCCAAGATCGGCCGGATACTGATGCTGCTATAAGTAATCTTCAGGCACTTATTTCTGAGAAGGACAGGGAGATAGAGGAGCTCAATAATAAGGTTGCCCAGTTGATGGGATCCAATGAGAGTTTGCGAGTTTCATCAGAAACACAGCTTGAAAAGTATCATAATATTGAGATTGCAGTGGATAAGATGATATCCTCTCTTGCAACCATTGTTAATCAGGAGCAAGTATTTGATAATTCTATAAGTGGGAAAATAATTTATATTGAGGAAGGCACTACGCTTTTGATTGAAAAGTATAATCAGATTCTTTCTGAAATTTATCAGCTTGGGCAGTCTTTCTCTGAGGTTGGCTTGGGTACTAGAGAGCAAGAACATGGGAATGTACTTGTTGATGCCCGTGCTGGATTACTGGAGTTCAAAAGAAAAGAAACAGAATTGGTTGAAAAAATGGCTCAGTTAGAAGACGAAAACCAGAAACTGGTTGAAGAGCTTGAGAAGGAAAGGGTGATGATAGGGACATTAAACACTCAACTTGGAAATATGAAAGCAGAACTTGAGCAGGAAAAGGTTAAATGTGCTAATACCAAAGAAAAGCTTAGTATGGCTGTAACAAAAGGAAAGGCATTGGTACAGCAGCGAGACTCACTAAAGACGTCACTAGCTGAAAAATCCAGTGAGCTTGAGAAATGTTTAACTGAGTTGCAGCAGAAATCCGTATCACTTGAAGCTGCTGAATTTACTAAGGAGGAGTTGGCCCAAAGTGAAAATATGGTTGAATCCCTGAAGAGCTCATTACTACAAAACAATACAATTTTTGAACAAGTAGAAGAAATCTTGTCTCTTGCAGAACCTCATCAGCCTGAAATGTCTGATCTGCCACAAAGAGTGAGATGGCTCGTGGATGACAGGAATGTGCTCAAGGGTGCCTTCCTGGAGTTGTGCAAATTGAAAGATGCTCTATCTCTGGTGGACCTACCAGAACACATATCATCATCTGATTTGGAATCACAAATGAATTGGCTTAGGGATTCTTTTCAAAGGGCTAGGGATGATACTTATGTTCTGCAGGATGAAATTTCTTCAATCGAGGAAGCATCCTGCAACTATATTGATCGCTTGAGCATTTCACTTTTGCTAGAATTGCAGGAAAAAGATTACCTTCAGTCAGAATTAACTGATTTGAAGCTCAAATATGAAGAGCTTCTCAGCATGAACCATCAGTTTTCCTTGGAGAAGGATCAGATAGTGAAGATGCTAGTTGACCTTTCTGCCCTAAACCTGGAAGATGAATGGATTGATCAATCCCCTTCCAGCATTTCTATGATAGTTGATTTGTGCTTTAAAAAATTAAAAGAACAGAATGGTACCTTCTCGAGCTCATCTTATATTGATGCTGAGTTGTTTGAAAGGATCCAAAGTCTCTTGTATGTTAGGGACCAACGATTAATGCTCTATGAGGATATATTGGAAGAAGAGATGCTAGTTAGATCTGATGTGAATAAGCTGTCAAATGAGTTGAAAGTGGCATCCGAGGACATTATAGCATTGAAAGAAGAAAGGAGTTCTCTACTGAAAGATCTTGAACGATCAGAGGAAAAGTCTTCCATGCTTAGGGATAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGGTTGGTTCAAGATAGGGACAATCTAAAAGGTCTTATAAATGAAAAGAAATCAGAGATAGAGCAACTGAAGCTTGATTTGCAGAAGCAAGAATCTGCAGTTTCTGAGTACAGGGATGAGATCAATAGATTGTCCAGTGATGTGCAAAGCATCCCAAAGCTGGAGGCTGATCTTCTGGAAATGAAACATGAAAGGAATCAGTTTGAACATTTCTTGATGGAGAGAAATAACATGTTACAGAGAATGATGGAGTGTATTGATGGTATCATTCTTCCGGTTGATCCAGCTTTTGATGAACCTATAGAAAAGGTGAAGTGGCTTGCTGGTTATGTCAGTGAATGCCAAGATGCTAAAGTAAATGCAGAGCAAGAGTTGCAAATTGTAAAGGAGGAAGCCAGTATACTTGAAACTAAATTAGCAGAAGCCCAAGCAAATGTAAAATCCCTTGAACAGGGATTATCTTCCTTAGAGGAGAGTGTTTCTCAACTTGCTGAAGAAAAGACAGAACTAGAACATGAGAAAGCAAGAGTTGAGGACGAGTTACAGAAATTTAAAGAAAAAGTTGTTGAAGTTTGTAGTACAACTAAGTCACTTGAAGATGCCTTATCACAGGCAGAAAAAGATATTTCTGTTCTCTCCAATGATAAAGAGCAGGCTCAAGCCGGTACAGTTGCTGCAGAGACAGAGTTAGTGAGAGTTAAAGAAGAAGCAACTAGGCAGACACAGAAACTAGAAGAGGCCAGCAGGACCATAAAGGATCTAGAAGATAAGCTATCTCAGGTTGAGATTAATGTCAATTTATTGTCTGAAAGGTATAATGCCAACCAAGTTGTCAAGATTGATATGGAAAATGAATTGAAGAAGCTGCAAGATGAAGGTGTGAATCACGCTAGCAAATTGGTAGATGCCTCTGCAACAATAAAATCACTGGAAGATGCATTACTGAAGGCGCAAGATGATATTTCTTCCCTAGAAGATGCAAATAAAATTGCTAAAGAGGAGATATCTTCACTTGGTTTTAAGTTAAATTCATGCATGGATGAGTTAGCTGGAAAGAATGGAAACTTAGAAAACAGGTCTGTGGAGCTCATTGAACTCCTTAATGATCTTCAGGTGCTTATGAAAGACAACACTTTATTTCCCAGAGTACAACAATGCTTTGAGAGGAAATTTGAGACCCTGAAGAATATGGATTCTGTGGTGAATAAATTAAGAGGCCAAATTGTTGCCATGATTGATAAAGATTCTGAAGGACACCTTATGGAGGAAGATCCACTTTTGACAAAAGAATACCTCGATAGCCTTGAAAATATTGAAGTCGAACTGGATTTTAGAGAGATTGGTGGCACTGATATTGACACTATCATTGCATCTTTTCGAAAGATTGCGAAAGGATTTCAGTCAAGAAACAAACACATTGCAGATAAAAACCAACTTGATGACTATTGTTGA 3684 0.4028 MSENHVSEQDSSWGSQFGNDHASNGVTESSTDSVAINQVERGGANDGVLGDTEDGTARDDMFVDCPDELSTLDSKMSDARIGAVAGDDEEEGEGEVNQVVHQQAHGGGGDSYSAGKVEQLRHKLEEAVAEKENIVQGYQEEREMVARGVIDLHCQLKALSSHQSLPNEGEIGVREVADFQLEEKIRECLEFVKTASQDRPDTDAAISNLQALISEKDREIEELNNKVAQLMGSNESLRVSSETQLEKYHNIEIAVDKMISSLATIVNQEQVFDNSISGKIIYIEEGTTLLIEKYNQILSEIYQLGQSFSEVGLGTREQEHGNVLVDARAGLLEFKRKETELVEKMAQLEDENQKLVEELEKERVMIGTLNTQLGNMKAELEQEKVKCANTKEKLSMAVTKGKALVQQRDSLKTSLAEKSSELEKCLTELQQKSVSLEAAEFTKEELAQSENMVESLKSSLLQNNTIFEQVEEILSLAEPHQPEMSDLPQRVRWLVDDRNVLKGAFLELCKLKDALSLVDLPEHISSSDLESQMNWLRDSFQRARDDTYVLQDEISSIEEASCNYIDRLSISLLLELQEKDYLQSELTDLKLKYEELLSMNHQFSLEKDQIVKMLVDLSALNLEDEWIDQSPSSISMIVDLCFKKLKEQNGTFSSSSYIDAELFERIQSLLYVRDQRLMLYEDILEEEMLVRSDVNKLSNELKVASEDIIALKEERSSLLKDLERSEEKSSMLRDKLSMAVKKGKGLVQDRDNLKGLINEKKSEIEQLKLDLQKQESAVSEYRDEINRLSSDVQSIPKLEADLLEMKHERNQFEHFLMERNNMLQRMMECIDGIILPVDPAFDEPIEKVKWLAGYVSECQDAKVNAEQELQIVKEEASILETKLAEAQANVKSLEQGLSSLEESVSQLAEEKTELEHEKARVEDELQKFKEKVVEVCSTTKSLEDALSQAEKDISVLSNDKEQAQAGTVAAETELVRVKEEATRQTQKLEEASRTIKDLEDKLSQVEINVNLLSERYNANQVVKIDMENELKKLQDEGVNHASKLVDASATIKSLEDALLKAQDDISSLEDANKIAKEEISSLGFKLNSCMDELAGKNGNLENRSVELIELLNDLQVLMKDNTLFPRVQQCFERKFETLKNMDSVVNKLRGQIVAMIDKDSEGHLMEEDPLLTKEYLDSLENIEVELDFREIGGTDIDTIIASFRKIAKGFQSRNKHIADKNQLDDYC* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0555 1227 Coils Coil 439 459 - -
Dod04g0555 1227 Coils Coil 974 1036 - -
Dod04g0555 1227 Coils Coil 373 397 - -
Dod04g0555 1227 Coils Coil 750 791 - -
Dod04g0555 1227 Coils Coil 1044 1078 - -
Dod04g0555 1227 PANTHER BNAA09G28150D PROTEIN 915 966 - -
Dod04g0555 1227 PANTHER BNAA09G28150D PROTEIN 1076 1220 - -
Dod04g0555 1227 Coils Coil 117 141 - -
Dod04g0555 1227 Coils Coil 694 728 - -
Dod04g0555 1227 MobiDBLite consensus disorder prediction 1 38 - -
Dod04g0555 1227 Coils Coil 331 365 - -
Dod04g0555 1227 PANTHER BNAA09G28150D PROTEIN 967 1014 - -
Dod04g0555 1227 SUPERFAMILY Tropomyosin 854 1071 - -
Dod04g0555 1227 Coils Coil 206 240 - -
Dod04g0555 1227 MobiDBLite consensus disorder prediction 1 63 - -
Dod04g0555 1227 PANTHER BNAA09G28150D PROTEIN 1009 1072 - -
Dod04g0555 1227 Coils Coil 939 966 - -
Dod04g0555 1227 Coils Coil 855 931 - -
Dod04g0555 1227 PANTHER BNAA09G28150D PROTEIN 49 917 - -
Dod04g0555 1227 PANTHER - 967 1014 - -
Dod04g0555 1227 Gene3D - 867 1057 - -
Dod04g0555 1227 PANTHER - 1009 1072 - -
Dod04g0555 1227 PANTHER - 915 966 - -
Dod04g0555 1227 PANTHER - 1076 1220 - -
Dod04g0555 1227 PANTHER - 49 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0555 Dod-Chr4 7924429 7928714 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0555 - - gmx:100799016 1606.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0555 04 7924429 7928714 Dod04g0555 04 7924429 7928714 ECH