Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0553 ATGTATGTGCAGTATGAAGAGCAAGATGGAAAGCCTCTACCCAAGTTCGGGGAATGGGATGTGAATGATCCTGCCTCTGCAGAAGGATTCACTGTTATATTCAACAAGGCCAGGGATGAGAAGAAAACCGCTGGATCATCAGGACGATTTCCTTCCAAAAGACAAGATTCCCGCAAGCGCAAGGATCAACATAACTACAAGGGTTCCTCAGTGAAAAAGTGGTTTTGCTTTGGCCCTTAG 240 0.4583 MYVQYEEQDGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTAGSSGRFPSKRQDSRKRKDQHNYKGSSVKKWFCFGP* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0553 79 MobiDBLite consensus disorder prediction 38 67 - -
Dod04g0553 79 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 8 43 IPR008700 -
Dod04g0553 79 PANTHER PROTEIN NOI4 7 63 - -
Dod04g0553 79 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 7 63 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0553 Dod-Chr4 7918411 7919078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0553 - - gmx:102669045 124.79