Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0543 ATGGCAGCAACCATAGCAACAACAATGGCCATGATCAATGCAAAGTGCCTTATCACACCCAAATCCCCCAACCCCACAAAGCTCACACCTTCTCCAAAACCCTCCCTTCTTTCCCTTCAGAACCTGCCAAAGGGCCTTGCCACAGCAAAACCATCAGAAAACTCCAACCTTTCCACTTCCCTAGCAGGCACTGCCATTGCTGGTGCCATCTTCTCTACCCTTGGAACCTCTGATGCAGCCTTTGCAGCACAACAAATAGCTGACATAGCCGAAGGCGACAACCGTGGCCTTGCACTGTTGCTGCCCATCATTCCAGCAATAGCATGGGTGCTTTTCAACATTCTGCAGCCAGCACTCAACCAACTCAACCGCATGAGGAGCACCAAAGGGGTGATCATTGGGCTTGGCCTTGGAGGGTTGGCAGCATCAGGTATGGTTTCACCACCTGAGGCATCAGCAGCAGCAAGCAGTGATATTGCTTTGATTGCTGATGCTGCTGCCAGTGACAATAGGGGGCAGCTTCTGCTGTTTGTGGTTACACCTGCTATTCTTTGGGTGCTCTACAACATCTTGCAGCCAGCTTTGAACCAGATCAACAGGATGAGATCCGAGTGA 615 0.5122 MAATIATTMAMINAKCLITPKSPNPTKLTPSPKPSLLSLQNLPKGLATAKPSENSNLSTSLAGTAIAGAIFSTLGTSDAAFAAQQIADIAEGDNRGLALLLPIIPAIAWVLFNILQPALNQLNRMRSTKGVIIGLGLGGLAASGMVSPPEASAAASSDIALIADAAASDNRGQLLLFVVTPAILWVLYNILQPALNQINRMRSE* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0543 204 Pfam Photosystem II protein Y (PsbY) 93 125 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Dod04g0543 204 Pfam Photosystem II protein Y (PsbY) 169 201 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Dod04g0543 204 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 203 - -
Dod04g0543 204 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 203 IPR038760 GO:0009523
Dod04g0543 204 Hamap Photosystem II protein Y [psbY]. 93 127 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0543 K02723 - vvi:100252545 247.284