Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0537 ATGAATCCACTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACAGGGCGAATCCCGTGGCGGCGAAATCGCCCGGCCAGTGCCAGCTAGGCCTCGATGCGTCCGTAAGAACAGTGAACGGCGCGTCCAAATCGAGCTCCTCCGCGCCGGATTCGTCTCACGGCGGAGGAAGCGGCGGAGATTCCGCGAAGGCGATTTCTGGCGGGAACTTCGAGGACGAGGATGCGGCTGCGGCTTCCGCGGCGGAGCCTAGGGAGTCGAAGGTTTTCGCCGGCGGCAATGGCGTCGCCGGAAGTGTCGCCGGGATCCTGTACAAGTGGGTGAACTACGGGAAAGGGTGGAGGTCGCGGTGGTTCGTGCTGGAGGACGGTGTTCTGTCGTACTACAAGATTCATGGACCGGACAAGATCGTGGTGAGCCCTGCGAGGGATCGAAGCGTGAGGGTGATCGGCGATGAGTCATCGAAGTTCATGAAGAAGAACAATTGGAACGTGAATCGGAACGTTACGAAGCAATGCAAGCCCTTCGGTGAGATACACTTGAAGGTTTCTTCGGTTCGTTCTAGCAAATCTGATGATAAGCGGCTTTCCATATTTACTGGGATGAAGACTCTTCACTTGCAGTGTGTATCTAGAGAAGACAGAGCCATGTGGATTGAAGCTCTGCAGTCCGCAAAAGATCTTTTCCCTAGATCTCTAACGAGTAGTGATCTTGCAACATCAGAAGATATTGTAGTTTCGACGGAGAAGCTGCGATCACGGTTGTCACAGGAAGGCATAAATGAAGCTGTTATTAGTGACTGTGAGTCTATTATGCTTTCTGAAGTCTCATATCTTCAAGGCAAGTTGAAGTTTCTTCAGCAGAAGCATCTTATGCTGCTGGACACCTTAAAACAACTGGAGACGGAGAAAATAGAGTTGGAAACTACTGTAGTGGATGAAACAAAGGAACGTGAGTCATATTGTGGACAAGGGAATAGACGGTTTAGTGATTTCTATTCCGTCATGTCCGAGGGCAGTGCTACTGATTCAGTAGCAGATAATGAAAGTCAAGATGGAGCAGATATTGAAACAGATGACGACGATGGAGCATTTTTTGACACAAATGAGTTTTTGTCTTCTGATGCCTTAAGAAGTGCTTCTTATCGAAGTAGGGAAGGTATGGGAAATGCCGGTATATATGACAGAGATTTTCTTTCAGATAGTTTGCATGGATTTGAGAAGGAGATCAAAGATGTAAGTTATCCATATGTCAGAAGAAGGGATAACTTACCAGAGCCAAAAGAGAAAGAGAGGCCCATGGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGCCTCCCTGTTTATTTTAATGAGCCACTCTCGTCCTTGCAAAAATGTTTTGAAGATTTGGAGTATTCATACCTGGTTGATAGAGCACTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATCCTAAACGTTGCAGCTTTTGCTGTGTCTGGCTATGCATCAACTGAAGGTCGACAGTGCAAACCTTTCAATCCTCTGCTTGGGGAGACTTATGAAGCTGACTATCCGGATAAAGGACTCAGGTTTTTTTCTGAAAAGGTTAGTCATCATCCAATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGGTGGAAGTTCTGGGCTGACTCTAACTTGAAAGGAAAATTCTGGGGGCGTTCTATTCAGTTAGATCCTGTCGGTGTCCTCACCCTACAGTTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTGACCACTTCCATATACAATATTATACTAGGTAAAATATATTGTGACCACTATGGTACAATGCGCATCAAGGGCAGCGGCAACTATTCTTGCAAACTAAAGTTCAAAGAGCAATCTATCATAGATCGAAATCCACATCAGGTTCATGGATTCGTTCAAGACAACAGCACTGGGGAGAAGGTGGCAATGTTAATCGGGAAATGGGATGGAGCAATGTACTATGTCCTGGGGGACCCAACTACAAAGCCTAAAGGCTATGATCCAATGACGGAAGCTGCATTATTGTGGGAAAGGGATAACTATCTTACCAAGACAAGATATAACCTCTCTCCTTTTGCAATATCCTTGAATGAAATAATACCTGGAATGTTAGAAAAGTTGCCTCCGACTGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAACGGAGAGTACGAGTTGGCAAATGCAGAGAAATTAAGACTTGAACAGTTGCAGAGACAGGTGATAACCACAACTGCTCCTACCGTTTGA 2298 0.4617 MNPLCCIAPVSIDRDRANPVAAKSPGQCQLGLDASVRTVNGASKSSSSAPDSSHGGGSGGDSAKAISGGNFEDEDAAAASAAEPRESKVFAGGNGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKIVVSPARDRSVRVIGDESSKFMKKNNWNVNRNVTKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGMKTLHLQCVSREDRAMWIEALQSAKDLFPRSLTSSDLATSEDIVVSTEKLRSRLSQEGINEAVISDCESIMLSEVSYLQGKLKFLQQKHLMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADIETDDDDGAFFDTNEFLSSDALRSASYRSREGMGNAGIYDRDFLSDSLHGFEKEIKDVSYPYVRRRDNLPEPKEKERPMGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNVAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNSTGEKVAMLIGKWDGAMYYVLGDPTTKPKGYDPMTEAALLWERDNYLTKTRYNLSPFAISLNEIIPGMLEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQVITTTAPTV* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0537 765 Pfam Pleckstrin homology domain 102 224 - -
Dod04g0537 765 ProSiteProfiles PH domain profile. 97 227 IPR001849 -
Dod04g0537 765 MobiDBLite consensus disorder prediction 340 360 - -
Dod04g0537 765 MobiDBLite consensus disorder prediction 41 55 - -
Dod04g0537 765 SUPERFAMILY Oxysterol-binding protein-like 431 756 IPR037239 -
Dod04g0537 765 MobiDBLite consensus disorder prediction 41 68 - -
Dod04g0537 765 Pfam Oxysterol-binding protein 436 756 IPR000648 GO:0008289
Dod04g0537 765 Coils Coil 283 317 - -
Dod04g0537 765 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 756 IPR000648 GO:0008289
Dod04g0537 765 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 756 - -
Dod04g0537 765 SUPERFAMILY PH domain-like 101 232 - -
Dod04g0537 765 Gene3D - 521 687 - -
Dod04g0537 765 Gene3D - 97 229 IPR011993 -
Dod04g0537 765 SMART PH_update 98 229 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0537 Dod-Chr4 7704100 7711195 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0537 K20456 - gmx:100788779 1308.12