Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0536 ATGTCTTCCCACGGCGTCTCCTCCGCCGTGCCGGCGGCGGAGTCGCTCCCATCGTCGAGCCACAGCTCCGAGAAGCTGAGCCTTCCATCACTCCAATCGAAGATGAAGTGCGACCCAGAAGGCTACGAATCGGAGCTTCTCCTCCTCCGAAACCAGTTCGATTCTTCCCTGGAGCTCTTCCTGCAACAGGCCGCCATGAACTTCGCTTCCATCAGCGGTATCGCCAGCGATCCCTCCGTCGCCAAAGATCTCGGCGACAGGGCCATGTTCCTCGCCCACGTCACCTCCTTCTACCCAAACCACCTCGCCGATTTTCCAAAAAAACTCGCCGATTTGATACGCTGCGCCGCAAGGACGCTCCCCTCGGGGCTCCGCTGCCACCTCGCCCAGGCTCTCATCCTCCTCGTCAATCGGAAGTTTGTTGAAATTCGTGAAACGCTGTCGTTGTTCATGGAGCTTCAAACCCTAGGTGACAGGATGCTGAAGAAGCTGGCATTTGACCATGTAGTGCACAGCATTAGGCGCATGAACCAGAAGCATAAAAATGATGCGAAGAACCGGGCGCTACAGAATGTGTTGTTTGCTATGCTGCAGCAAGAAGATGAAGATCTAGCTAAGAGAGCGCTGGTGACACTGTGCGAGCTTCACAGGAGAAAAGTGTGGTTTGATGAGAGAACAGCAAATGCAATTTGCACAGCTTCTTTTCATCCAGCATCAAGGATCATGATAGCGGCTTTATCGTTTCTGCTTGATTATGAGAAGATTGAAAATGATGAAGATAGTGATGATTCGGACAGTGATGATGAATTGACTGGATCACCTCAAGTTGTACTTAGTAGGGAGACAATTTATAAGGCAAACCACCAAGGAACATCAGCTAGCAAAAAGAAAAAGAAAGCCAAATTGCAACGTGCCATACGCAACATGAAAAGGAAGCAACGCTTGTCGTCTGAGAGGAATAATAACAGTTATTATTCACCACTTAACCATCTGAAAGATGCACAGGGTTTTGCTGAGAAGCTGTTCTCACGTCTTCAGAATTGTAATGAGCGTTTTGAGGTTAAGATGATGATGTTGAAATTGATTGCTCGAACAGTTGGGCTTCACCGGTTAATTTTGTTAAACTTTTATCCATATCTTCAGAAATATATCCAGCCACATCAACGTGATGTTACAAATTTGCTTGCAGCAATGGTTCAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAGCCCTTGTTCAAACAAATAGTAAATCAATTTGTACATGATCGCTCACGTCCTGAGGCCATCACTGTTGGAATAAATGCGGTCAGGGAGATATGCATGCGGATGCCATTGTTGATGAATGAAGATTTACTACAAGACCTAGCCCTGTATAAGAAATCACATGAGAAAGCAGTTTCAGTAGCCGCTCGATCTCTGATTGCCTTATTTAGAGAGGTTTGCCCTTCGCTGTTAGTTAGGAGGGACCGTGGGAGGCCTATTGACCCCTTGGCAAGACCAAAAGCCTATGGAGAAGTCAATGTTGCGACTGATGTTCCTGGTGCTGAGTTGTTGCATGTTGTAGACAATGATGATGAGCAGGAGAGTGGTGATTCTGATGTCTCTGTATGCAGTGGCTCTGACAATGACCAGGAAAATGATATGATGAGTATCAATAATGTTGATGATGATGATGAGAACCAGCTAAGCAGTAGTGATAATTCTGGAAGCGATGATGACAAAGATAGCAAGAACGATGTTGGATCAGAAGAAGAAGATGAAGATGAGCTGAGTTCTGATTGCGAAACTGGTGTGAGTGATGCTGATGATGATGTAGATAAGGGGAGTGACCTTGAAGACAGTGAACTAGCTGATGAAGATGATGGCGAGGTTTCTGAGCACGAAGATGATGATAAAAGTGTGGATACAAAAGGTGGAAAGAAAGAGACAGCGAAAAAAAGGAAGTTCACTGATTTTAATGGTCAACTTGTAGCTGCTGATACAAGTCTCCGGGCTTTGAAGAAATTGGCAGGGACAACAATGGGGCATACCCTACCAGAATCTACGGATGGAATTCTTTCGAATGAGGACTTCCGGAGGATCAAGGAACTAAAGGCAAAACAAGAAGCAAAAAATACATTGGCTCAGCATGGGCTAGCAAAGTCAGCAGCTATTAAGGTTCCGAGTTCTGATCAACTAAGTTTGAAGCGAGTGGATGGCGCCATGCTTGAAGTTCATGTAAAGAAAAAGCTGAACAAGGAAGAAAGACTGGCATTGGTTAGAGCCGGGAGGGAGGATAGAGGAAAATACCATGCGCGAGCAGCTGTAAAACAGAAAAAGACGGGTGGCCTAAGCAACAGACAGAAGGAACACAAGAAGAAAATGCCGGTGGCTGCAAAGAGAGCCAAGGTTGCCAGATCTCGGGTGGAGAAAAAGAAAAAGAATCAAAGGGCCGGCAAACAGTTCCGAGGGAGGAAAGCGTGGAAATGA 2478 0.4629 MSSHGVSSAVPAAESLPSSSHSSEKLSLPSLQSKMKCDPEGYESELLLLRNQFDSSLELFLQQAAMNFASISGIASDPSVAKDLGDRAMFLAHVTSFYPNHLADFPKKLADLIRCAARTLPSGLRCHLAQALILLVNRKFVEIRETLSLFMELQTLGDRMLKKLAFDHVVHSIRRMNQKHKNDAKNRALQNVLFAMLQQEDEDLAKRALVTLCELHRRKVWFDERTANAICTASFHPASRIMIAALSFLLDYEKIENDEDSDDSDSDDELTGSPQVVLSRETIYKANHQGTSASKKKKKAKLQRAIRNMKRKQRLSSERNNNSYYSPLNHLKDAQGFAEKLFSRLQNCNERFEVKMMMLKLIARTVGLHRLILLNFYPYLQKYIQPHQRDVTNLLAAMVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICMRMPLLMNEDLLQDLALYKKSHEKAVSVAARSLIALFREVCPSLLVRRDRGRPIDPLARPKAYGEVNVATDVPGAELLHVVDNDDEQESGDSDVSVCSGSDNDQENDMMSINNVDDDDENQLSSSDNSGSDDDKDSKNDVGSEEEDEDELSSDCETGVSDADDDVDKGSDLEDSELADEDDGEVSEHEDDDKSVDTKGGKKETAKKRKFTDFNGQLVAADTSLRALKKLAGTTMGHTLPESTDGILSNEDFRRIKELKAKQEAKNTLAQHGLAKSAAIKVPSSDQLSLKRVDGAMLEVHVKKKLNKEERLALVRAGREDRGKYHARAAVKQKKTGGLSNRQKEHKKKMPVAAKRAKVARSRVEKKKKNQRAGKQFRGRKAWK* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0536 825 Pfam SDA1 450 822 IPR007949 -
Dod04g0536 825 MobiDBLite consensus disorder prediction 1 30 - -
Dod04g0536 825 SUPERFAMILY ARM repeat 89 487 IPR016024 -
Dod04g0536 825 MobiDBLite consensus disorder prediction 789 825 - -
Dod04g0536 825 Coils Coil 292 315 - -
Dod04g0536 825 MobiDBLite consensus disorder prediction 632 651 - -
Dod04g0536 825 MobiDBLite consensus disorder prediction 535 552 - -
Dod04g0536 825 MobiDBLite consensus disorder prediction 761 825 - -
Dod04g0536 825 PANTHER PROTEIN SDA1 HOMOLOG 23 825 - -
Dod04g0536 825 Pfam NUC130/3NT domain 90 141 IPR012977 -
Dod04g0536 825 PANTHER HSDA/SDA1-RELATED 23 825 IPR027312 GO:0000055|GO:0042273
Dod04g0536 825 MobiDBLite consensus disorder prediction 1 36 - -
Dod04g0536 825 MobiDBLite consensus disorder prediction 527 651 - -
Dod04g0536 825 MobiDBLite consensus disorder prediction 581 631 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0536 K14856 - gmx:100816774 1202.19