Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0527 ATGAGCAATGAGATAATCCATGTTACAAAGTCGCTTATTTATGTTGCTGTATATTGGATCACGAGAAGCAGTGTAGCATGCCTTTCTCAAGTCATGGATATCAGAGCCAAGAAACATGAGCAAGTGTATTCAGATTCAACAATAATTGCTGCTTGGGAGCTGTCAAGTTTGGCGTATAGGTTAAGTGGCATATGCAACAGTCTCAGAGGACAGGTGGATGTGTGTCACCAAGAAATAGAGAAAAACCTGCATGATAGGCTGTTGAATCTTGTCAACGAGGAGGACATTGATAATCAGAAGGTTCTCAATTTATTGTTTCCTTCTAAGAATTACTTGCCATTGAAAGATTGCTCAACACAAGTGAAGCTTGGTGTGTCTGAATTGAAAAATAAGATAGTTCTCTTGTTAATCTCAAAGCCGCAACTACTCGCCCTGGAAGAATTGCTCTTACTAGTTCAGCAAACATGTGATCATCCTTTGAACGAGGGATTGAAGGACAGTTATAAGATTGTGTGGGTTCCCCTTCCATCTTCTGATACATGGACTGATGCTGAAGAGAGTATTTTCAATTTTCTATCAGATTCATTGCCTTGGTATGCTGTTTGGAAGCCAAGGCTACTTAGCTCAGCTGTGATGAAGTACATTCGGGAAGAATGGAACTACAAGGAGGAGCCACTCATGGTAGCATTGGATTTAAATGGGAAGGTTACAAATTCCAATACTCTTGATATGATCATGATTTGGGGAGCCAGAGCTTACCCCTTTTCAGCTTCAAAAGAGGCTGAGCTCTGGCAAGACCAGAATTTGACAATGCAACTTCTACTGGGTGACATTGACCCTCTTCTTGCTTATTGGGTAGAAAAAGGCAAAAATATTTGCATTTATGGGAGTGAAAACTTGGCGTGGATCCAACAATTCAATGACAACATAACCAAGCTCAAAAGGGAAGGTCTGCAGCTGGAAACAGTATATGTTGGCATTGGTCACTTAAGTGAACATGTCAAAAAAATAATGGCGAGTTCTGCTAAAATATATCTCACTGTTCCACTTTCCTTCACAAAAGTACAATTCTTTTGGCTTCGGTTGGAGAGTATGAGAAGGTCAAAATTCAGACTAGGGAAGAATCCACGTTCTGATCATATGCTAGAAGAGTTGTCAACTTTGCTTGACATGGATGATAGAGAACAAGGCTGGGCAGTGATTGGAAGTGGGAGTTCAGCTGATGTTATAAGGCTTCAAGGAATGCAGTTGAAGGAATTCTTAGGGAGCTATCATGAGTGGGGAGAATATGTAGACAAGTTGGGATTGCTGGGTGCCGCAAGAAGCTTCATAGACCCTACCTATCTAGCAAGGCCTTGCAATCACTCTTACTTGATTCCCTCAAGTGAAGGACTAACTCAAGGAAGTGTAACTTGTCAAGGGTGCAAGCGTCCTATGAAGAAGTTTGTGGTGTACCAGCCATGA 1464 0.4146 MSNEIIHVTKSLIYVAVYWITRSSVACLSQVMDIRAKKHEQVYSDSTIIAAWELSSLAYRLSGICNSLRGQVDVCHQEIEKNLHDRLLNLVNEEDIDNQKVLNLLFPSKNYLPLKDCSTQVKLGVSELKNKIVLLLISKPQLLALEELLLLVQQTCDHPLNEGLKDSYKIVWVPLPSSDTWTDAEESIFNFLSDSLPWYAVWKPRLLSSAVMKYIREEWNYKEEPLMVALDLNGKVTNSNTLDMIMIWGARAYPFSASKEAELWQDQNLTMQLLLGDIDPLLAYWVEKGKNICIYGSENLAWIQQFNDNITKLKREGLQLETVYVGIGHLSEHVKKIMASSAKIYLTVPLSFTKVQFFWLRLESMRRSKFRLGKNPRSDHMLEELSTLLDMDDREQGWAVIGSGSSADVIRLQGMQLKEFLGSYHEWGEYVDKLGLLGAARSFIDPTYLARPCNHSYLIPSSEGLTQGSVTCQGCKRPMKKFVVYQP* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0527 487 Pfam Sieve element occlusion N-terminus 6 92 IPR027942 -
Dod04g0527 487 Pfam Sieve element occlusion C-terminus 258 486 IPR027944 -
Dod04g0527 487 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 3 486 IPR039299 GO:0010088
Dod04g0527 487 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 3 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0527 Dod-Chr4 7534417 7537387 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0527 - - gmx:100819823 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0527 04 7534417 7537387 Dod04g0527 04 7534417 7537387 ECH
Dod04g2339 04 47267077 47269380 Dod04g0527 04 7534417 7537387 PCT