Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0525 ATGGCCAGGTTCTCCATGCTCTTGACCATCCTCTATTCCCTCCTCCTCCTCTTTGTTTCCACACTCCAAACCAAAGCTCTTCCGCTTCACACCAATGGACGGTGGATAGTGGACGAAGGAGGGAAAAGAGTGAAGCTGGCATGTGTGAACTGGGTGTCCCATTTGGATGCCTCAGTGGCTGAGGGTCTAAGCAAGCAACCCCTTGATGCCATTTCTAAGTTCATCAAGTCCATGGGATTCAACTGTGTTAGGCTCACTTGGCCACTTCTGTTGGTCACCAATGAGTCTCTTGCTTCCCTTACCGTGAGACAGTCCTTCAGCAATCTTGGGTTGCTTGATTCCATCTCTGGTGTCCAAGCCAACAATCCCTCCATCATCGATCTTCCTCTCATCGAAGCTTACCAGGCAGTGGTGAAAAACCTAGGAGACAACGATGTGATGGTGATTTTGGACAACCACATAACCCAGCCTGGGTGGTGCTGCAGTGCAATGGACGGCAATGGGTTCTTCGGAGACAAGTATTTTGATCCAGATCTCTGGATAATGGGCCTTACTAAGATGGCCACCATTTTCACTGGAGTGGCTAATGTGGTGGGAATGAGCCTTCGAAATGAGTTAAGAGGCCCCAAACAGAATGTCAACGATTGGTACAGGTACATGCCTAAAGGAGCAGAAGCTGTGCATGCTGCAAATCCGAATGTTCTAGTCATTTTGTCAGGCCTAAATTTTGACACAGACTTATCATTCATTCAAAACCAGCCAGTGAAACTCACCTTTGATGGGAAACTAGTATTTGAGGTGCACCACTATGGCTTTAGTGACGGTCAAGCATGGGCATCGGGGAATCCGAACCAAGTGTGTGGACAAGTCACAGGAAATATGATGAGAAAGACTGGGTTCTTGTTGGACCAAGGGTGGCCATTGTTTGTGAGTGAATTTGGGGTAGACATGAGAGGAACAAATGTTAATGACAACAGGTTCTTCAATTGCTTCATGGCTGTGTTAGCTGAGCTTGACTTGGATTGGGCCTTGTGGACATTGGTTGGTAGTTACTACCTTAGACAAGGTGTTGTTGGACTAATTGAGTATTATGGGATTCTCAATTCGGATTGGAGTCAAGTTCGGAATACCACTTTCCTACAAAGGCTCTCAGCTATTCAACTTCCTTTTCGAGGGCCAGGCTTATCAGAAGCTAAAGCATATAAAGTGATTTTTCATTCATTGACTGGTCTTTGTGTCTTAAGAGAGTCACTAGTTGACTCGTTGAGGTTGGGACCTTGCTCTATTTCTGATGGTTGGGACTACACACCCCAGAGAACACTTTCAATAAAGGATACATGTTTCTGTTTACAAGCAGAAGGAGAAGGGAAGCCAACAAAACTTGGAACATCATGTTCAGGTCCGAACTCAATATGGGAAATGATCTCTGATTCTAAGATGCACCTCTCATCTAAAGTCAGCAATAGGACTTCTAGTGTTTGCTTGGATGTGGACACTGACAACAATATCATTGTTACCAATACTTGCAAATGCCTAAGCACAGATAACACGTGTGACCCTGCAAGCCAGTGGTTCGTACTTGTTGACAGCACAAGGAGGTCAACCTCAACATCATCCAAAGACTCCATGTCTGGTTTATCAAAAAATGAGATTTTTGGTAACCATTGA 1668 0.4514 MARFSMLLTILYSLLLLFVSTLQTKALPLHTNGRWIVDEGGKRVKLACVNWVSHLDASVAEGLSKQPLDAISKFIKSMGFNCVRLTWPLLLVTNESLASLTVRQSFSNLGLLDSISGVQANNPSIIDLPLIEAYQAVVKNLGDNDVMVILDNHITQPGWCCSAMDGNGFFGDKYFDPDLWIMGLTKMATIFTGVANVVGMSLRNELRGPKQNVNDWYRYMPKGAEAVHAANPNVLVILSGLNFDTDLSFIQNQPVKLTFDGKLVFEVHHYGFSDGQAWASGNPNQVCGQVTGNMMRKTGFLLDQGWPLFVSEFGVDMRGTNVNDNRFFNCFMAVLAELDLDWALWTLVGSYYLRQGVVGLIEYYGILNSDWSQVRNTTFLQRLSAIQLPFRGPGLSEAKAYKVIFHSLTGLCVLRESLVDSLRLGPCSISDGWDYTPQRTLSIKDTCFCLQAEGEGKPTKLGTSCSGPNSIWEMISDSKMHLSSKVSNRTSSVCLDVDTDNNIIVTNTCKCLSTDNTCDPASQWFVLVDSTRRSTSTSSKDSMSGLSKNEIFGNH* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0525 555 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 6 543 - -
Dod04g0525 555 Gene3D - 403 530 - -
Dod04g0525 555 MobiDBLite consensus disorder prediction 534 555 - -
Dod04g0525 555 SUPERFAMILY (Trans)glycosidases 26 379 IPR017853 -
Dod04g0525 555 SUPERFAMILY Ricin B-like lectins 399 526 IPR035992 -
Dod04g0525 555 Gene3D Glycosidases 27 388 - -
Dod04g0525 555 CDD RICIN 401 509 IPR000772 -
Dod04g0525 555 Pfam Cellulase (glycosyl hydrolase family 5) 66 347 IPR001547 GO:0004553|GO:0071704
Dod04g0525 555 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 6 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0525 Dod-Chr4 7501258 7506997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0525 20 546 Glycoside Hydrolase AT1G13130 60.829 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0525 - - gmx:100790415 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0525 04 7501258 7506997 Dod04g0525 04 7501258 7506997 ECH