Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g0516 ATGGCGGAGCTGAGGCACTCCACCAGCACACTGGGCGCGCGCGCCACCTCCTCTCCGATGAAGCGCGACGCCGTTTCCTCCCCTTTCGTTCCCGCTGCCAGCGCCGACCACCACCACGACGTTCCCGACGACGACGACAACGACGAGGACCGCGACCGCCACTCCCTGAAGGACCTCCGCCACCGTCCCTTCCACTACCTCTCCTCCTTCTTCGGCGACGACCCTAGGGTTCCTCCTTTTCTTCACTCCTCCTCCAGGATCTCCCTCTTCTTCACCTTCTTCCTCATCCTCATCGGCATCTTCTGCGTCTTCTCAATCGTCAACAAATTGAATGCTCCTTACTTGTGTAAAAAGGATGGAATTGTTCTCCATTGCCCTCACGTTAAAGAATCGCCGTCGCTGTGGGAAAATCCTTTCTCGTCGACAACGTCTTGGAAGCCTTGTGCTGAACGCCGTGATGGTGTTATATCAGAGCTTCCTCCAGAAAACGAAACAAATGGCTATATATTTATCCATGCTGAAGGGGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTGGCAAAAATAATGAATGCGACTCTTATTCTGCCGGTATTGAAGCAAGACCAGATTTGGAAAGACCGAACGAAATTTGAAGACATTTTTGATGTGGACCACTTCATAGACTATCTGAAGTATGATGTCCGAATAGTCCGTCATATCCCAGAATGGTTTACTGATAAAGCAGAGCTATTTACTAGTATAAGGCGGACAGTAAAAAACATTCCAAAATATGCACCTGCACAATTTTACATTGATAATGTTCTGCCTCGAATCAAGGAGAAGAAGATTATGGCTCTAAAACCTTTTGTTGACAGGCTGGGATATGACAATGTTCCTTCCGAAATCAACAAGTTGAGATGTAGGGTTAATTATCATGCTCTTAAATTTCTTCCTGATATAGAGCAGATGGCTGATTTACTGGCATCAAGGATGAGGAACCGAACTGGCAGCTCAAATCCTTATATGGCTCTGCATCTTAGATTTGAGAAAGGAATGGTGGGCCTGTCATTCTGTGATTTTGTGGGGACAAGAGAAGAGAAAGCTAAAATGGCAGAGTACAGAAAAAAGGAGTGGCCTCGACGGTATAAGAATGGTTCCCACCTGTGGCAACTGGCTCTGCAGAAGCGAAAGGAGGGACGATGTCCTCTAGAGCCTGGAGAAGTGGCTGTTATTCTTCGGGCCATGGGCTATCCGAAGGAAACTCAAATTTATGTGGCTTCTGGCCAAGTATATGGTGGACAGAACCGGATGGCTCCACTGAGGAATATGTTCCCTAATCTGGTTACGAAGGAGGAGTTGGCAACTAAAGAAGAGCTGGATGGTTTCAGAAAGCATGTGACGAGCCTTGCAGCTCTTGACTTCTTGGTGTGCTTGAAATCTGACGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGTTGATCATTGGTGCCCGCCGATACATGGGTCACCGTCTAAAATCAATTAAGCCTGACAAAGGATTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTACTTTTGTAGAAGATGTTGTTGTTACTCATCAAACACGAACGGGATTGCCTGAAGAGACTTTCCCTAACTATGACCTCTGGGAGAACCCTCTGACTCCTTGCATGTGTAGAGCTTGA 1695 0.4726 MAELRHSTSTLGARATSSPMKRDAVSSPFVPAASADHHHDVPDDDDNDEDRDRHSLKDLRHRPFHYLSSFFGDDPRVPPFLHSSSRISLFFTFFLILIGIFCVFSIVNKLNAPYLCKKDGIVLHCPHVKESPSLWENPFSSTTSWKPCAERRDGVISELPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDRTKFEDIFDVDHFIDYLKYDVRIVRHIPEWFTDKAELFTSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPSEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g0516 564 Pfam GDP-fucose protein O-fucosyltransferase 168 500 IPR019378 -
Dod04g0516 564 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 564 - -
Dod04g0516 564 Gene3D - 309 507 - -
Dod04g0516 564 MobiDBLite consensus disorder prediction 9 23 - -
Dod04g0516 564 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 564 - -
Dod04g0516 564 MobiDBLite consensus disorder prediction 1 53 - -
Dod04g0516 564 MobiDBLite consensus disorder prediction 36 53 - -
Dod04g0516 564 CDD O-FucT_plant 168 503 IPR024709 -
Dod04g0516 564 PIRSF UCP009360 52 564 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g0516 Dod-Chr4 7377665 7383198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g0516 134 563 Miscellaneous Gene Families AT1G22460 35.746 1.11e-92 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g0516 - - gmx:100809112 979.163